API for DelilahYM/rseqR_mod
RNA-seq data processing pipeline

Global functions
%>% Man page
annotate_data Man page Source code
build_index Man page Source code
check_cmd Source code
check_sample Man page Source code
convert_paths Source code
create_dir Source code
deseq2_analysis Man page Source code
edger_analysis Man page Source code
ens2entrez Source code
ens2symbol Source code
exploratory_analysis_deseq2 Man page Source code
exploratory_analysis_edger Man page Source code
extract_numbers Source code
give_error Source code
give_note Source code
give_warning Source code
limma_voom_analysis Man page Source code
make_MA Man page Source code
make_PCA Man page Source code
make_design Source code
make_heatmap Man page Source code
make_scree Man page Source code
make_upset Man page Source code
make_volcano Man page Source code
move_file Source code
pathway_analysis Man page Source code
read_salmon Man page Source code
reduce_path Source code
remove_file Source code
run_cmd Source code
run_dea Man page Source code
run_fastqc Man page Source code
run_multiqc Man page Source code
run_salmon Man page Source code
run_tximport Man page Source code
sanity_check Man page Source code
theme_publication Source code
trim_fastq Man page Source code
DelilahYM/rseqR_mod documentation built on Dec. 17, 2021, 4:11 p.m.