CombinedScatter: CombinedScatter
In Displayr/flipStandardCharts: Standard R interactive charts
View source: R/combinedscatterplot.R
CombinedScatter R Documentation
CombinedScatter
Description
Scatter plot (uses rhtmlCombinedScatter)
Usage
CombinedScatter(
x = NULL,
y = NULL,
scatter.x.column = 1,
scatter.y.column = 2,
scatter.labels = NULL,
scatter.labels.name = "",
scatter.sizes = NULL,
scatter.sizes.name = "",
scatter.sizes.column = 3,
scatter.sizes.as.diameter = FALSE,
scatter.colors = NULL,
scatter.colors.name = "",
scatter.colors.column = 4,
scatter.colors.as.categorical = TRUE,
scatter.groups = NULL,
scatter.groups.column = NULL,
scatter.labels.as.hovertext = TRUE,
scatter.max.labels = 50,
scatter.max.groups = 50,
annotation.list = NULL,
colors = ChartColors(12),
trend.lines = FALSE,
logos = NULL,
logo.size = 0.5,
fit.type = "None",
fit.window.size = 3,
fit.ignore.last = FALSE,
fit.line.type = "dot",
fit.line.width = 1,
fit.line.colors = colors,
fit.line.opacity = 1,
fit.CI.show = FALSE,
fit.CI.colors = fit.line.colors,
fit.CI.opacity = 0.4,
legend.show = TRUE,
legend.orientation = "Vertical",
legend.wrap = TRUE,
legend.wrap.nchar = 30,
global.font.family = "Arial",
global.font.color = rgb(44, 44, 44, maxColorValue = 255),
title = "",
title.font.family = global.font.family,
title.font.color = global.font.color,
title.font.size = 16,
subtitle = "",
subtitle.font.family = global.font.family,
subtitle.font.color = global.font.color,
subtitle.font.size = 12,
panel.title.font.family = global.font.family,
panel.title.font.color = global.font.color,
panel.title.font.size = 14,
nrows = 2,
share.axes = TRUE,
x.order = NULL,
panel.x.gap = 0.2,
panel.y.gap = 0.3,
footer = "",
footer.font.family = global.font.family,
footer.font.color = global.font.color,
footer.font.size = 8,
footer.wrap = TRUE,
footer.wrap.nchar = 100,
data.label.font.family = global.font.family,
data.label.font.color = global.font.color,
data.label.font.autocolor = FALSE,
data.label.font.size = 10,
data.label.format = "",
data.label.prefix = "",
data.label.suffix = "",
opacity = NULL,
background.fill.color = "transparent",
charting.area.fill.color = background.fill.color,
legend.font.color = global.font.color,
legend.font.family = global.font.family,
legend.font.size = 10,
legend.position.y = 1,
legend.position.x = 1.02,
legend.title = "",
legend.title.font.color = global.font.color,
legend.title.font.family = global.font.family,
legend.title.font.size = 12,
legend.title.wrap = TRUE,
legend.title.wrap.nchar = 30,
legend.bubble.title = "",
legend.bubble.font.color = global.font.color,
legend.bubble.font.family = global.font.family,
legend.bubble.font.size = 10,
legend.bubble.title.font.color = global.font.color,
legend.bubble.title.font.family = global.font.family,
legend.bubble.title.font.size = 12,
legend.bubble.title.wrap = TRUE,
legend.bubble.title.wrap.nchar = 30,
margin.autoexpand = TRUE,
margin.top = NULL,
margin.bottom = NULL,
margin.left = NULL,
margin.right = NULL,
grid.show = TRUE,
y.title = "",
y.title.font.color = global.font.color,
y.title.font.family = global.font.family,
y.title.font.size = 12,
y.line.width = 0,
y.line.color = rgb(0, 0, 0, maxColorValue = 255),
y.tick.mark.length = 0,
y.tick.mark.color = "transparent",
y.bounds.minimum = NULL,
y.bounds.maximum = NULL,
y.tick.distance = NULL,
y.tick.maxnum = NULL,
y.zero.line.width = 0,
y.zero.line.color = rgb(225, 225, 225, maxColorValue = 255),
y.zero.line.dash = "Dash",
y.grid.width = 1 * grid.show,
y.grid.color = rgb(225, 225, 225, maxColorValue = 255),
y.grid.dash = "Solid",
y.tick.show = TRUE,
y.tick.suffix = "",
y.tick.prefix = "",
y.tick.format = "",
y.hovertext.format = "",
y.tick.font.color = global.font.color,
y.tick.font.family = global.font.family,
y.tick.font.size = 10,
x.title = "",
x.title.font.color = global.font.color,
x.title.font.family = global.font.family,
x.title.font.size = 12,
x.line.width = 0,
x.line.color = rgb(0, 0, 0, maxColorValue = 255),
x.tick.mark.length = 3,
x.tick.mark.color = "transparent",
x.bounds.minimum = NULL,
x.bounds.maximum = NULL,
x.tick.distance = NULL,
x.tick.maxnum = NULL,
x.zero.line.width = 0,
x.zero.line.color = rgb(225, 225, 225, maxColorValue = 255),
x.zero.line.dash = "Dash",
x.grid.width = 1 * grid.show,
x.grid.color = rgb(225, 225, 225, maxColorValue = 255),
x.grid.dash = "Solid",
x.tick.show = TRUE,
x.tick.suffix = "",
x.tick.prefix = "",
x.tick.format = "",
x.hovertext.format = "",
x.tick.angle = NULL,
x.tick.font.color = global.font.color,
x.tick.font.family = global.font.family,
x.tick.font.size = 10,
x.tick.label.wrap = TRUE,
x.tick.label.wrap.nchar = 21,
hovertext.font.family = global.font.family,
hovertext.font.size = 11,
marker.size = 6,
swap.x.and.y = FALSE,
legend.bubbles.show = NULL,
color.scale.show = NULL,
label.auto.placement = TRUE,
quadrants.show = FALSE,
x.midpoint.type = "Average",
x.midpoint.input = NULL,
x.midpoint.value = NULL,
y.midpoint.type = "Average",
y.midpoint.input = NULL,
y.midpoint.value = NULL,
x.midpoint.line.color = rgb(0, 0, 0, maxColorValue = 255),
x.midpoint.line.dash = "Solid",
x.midpoint.line.width = 1,
y.midpoint.line.color = rgb(0, 0, 0, maxColorValue = 255),
y.midpoint.line.dash = "Solid",
y.midpoint.line.width = 1,
quadrant.top.left.color = "transparent",
quadrant.top.right.color = "transparent",
quadrant.bottom.left.color = "transparent",
quadrant.bottom.right.color = "transparent",
quadrant.top.left.title = "",
quadrant.top.left.title.font.family = global.font.family,
quadrant.top.left.title.font.color = global.font.color,
quadrant.top.left.title.font.size = 12,
quadrant.top.right.title = "",
quadrant.top.right.title.font.family = global.font.family,
quadrant.top.right.title.font.color = global.font.color,
quadrant.top.right.title.font.size = 12,
quadrant.bottom.left.title = "",
quadrant.bottom.left.title.font.family = global.font.family,
quadrant.bottom.left.title.font.color = global.font.color,
quadrant.bottom.left.title.font.size = 12,
quadrant.bottom.right.title = "",
quadrant.bottom.right.title.font.family = global.font.family,
quadrant.bottom.right.title.font.color = global.font.color,
quadrant.bottom.right.title.font.size = 12,
plot.border.show = FALSE,
plot.border.color = rgb(0, 0, 0, maxColorValue = 255),
plot.border.width = 1,
fixed.aspect = FALSE
)
Arguments
x
A numeric vector for the x-axis coordinates (which may be named); or a matrix or datarame; or a list of matrices where each matrix share the same row and column names.
y
Optional numeric vector for the y-axis coordinates. Should contain the same number of observations as x. If not provided, will use x instead.
scatter.x.column
When x is a dataframe or matrix, the index of the column (1-based) which contains the x-coordinate data.
scatter.y.column
When x is a dataframe or matrix, the index of the column (1-based) which contains the y-coordinate data.
scatter.labels
Optional vector for labelling scatter points. This should be the same length as the number of observations in x and y.
scatter.labels.name
Character; Used for labelling subtitles and footers.
scatter.sizes
Numeric vector determining of the size of each observation. These can alternatively be provided as a column in x.
scatter.sizes.name
Character; Used for labelling footers and legends.
scatter.sizes.column
When x is a dataframe or matrix, the index of the column (1-based) which contains scatter.sizes data.
scatter.sizes.as.diameter
Whether to show the points with diameter (instead of area, which is the default) proportional to the sizes variable.
scatter.colors
Numeric, character, or categorical vector determining the color of each observation. These can alternatively be provided as a column in x.
scatter.colors.name
Character; Used for labelling footers.
scatter.colors.column
When x is a dataframe or matrix, the index of the column (1-based) which contains scatter.colors data.
scatter.colors.as.categorical
Boolean; Whether to treat colors as a categorical groups, or a numeric scale.
scatter.groups
A factor of the same length as x which is
used to aggregate the data for small multiples.
scatter.groups.column
The column of x which is used to aggregate
the data for small multiples (ignored when scatter.groups is provided)
scatter.labels.as.hovertext
Logical; if TRUE, labels are shown has hovers; otherwise, as a labeled scatterplot.
scatter.max.labels
Integer; the maximum number of labels to show on a Labeled Scatterplot.
If the number of labels is greater than this parameter, extra labels will be hidden by default but
can be toggled on by clicking on the marker.
scatter.max.groups
Maximum number of different color categories in data. The is
equivalent to the number of enteries in the legend. Increasing this too high may cause
performance issues.
annotation.list
Optional list of annotations to modify the data labels.
colors
A vector of colors to use in the chart. When scatter.colors.as.categorical, the vector of colors should have the length as the number of categories in scatter.colors. If scatter.colors is used as numeric vector, then a color ramp is constructed from the colors listed.
trend.lines
Boolean indicating whether to plot trend lines for multiple tables.
logos
Optional list of images to be used to label scatterplot instead of the row names.
This should be input as a comma-seperated list of URLs.
logo.size
Numeric controlling the size of the logos.
fit.type
Character; type of line of best fit. Can be one of "None", "Linear", "LOESS",
"Friedman's super smoother", "Cubic spline", "Moving average", "Centered moving average".
fit.window.size
Integer; Use to determine how the average is computed when fit.type
"Moving average" or "Centered moving average".
fit.ignore.last
Logical; whether to ignore the last data point in the fit.
fit.line.type
Character; One of "solid", "dot", "dash, "dotdash", or length of dash "2px", "5px".
fit.line.width
Numeric; Line width of line of best fit.
fit.line.colors
Character; a vector containing one or more colors specified as hex codes.
fit.line.opacity
Opacity of trend line as an alpha value (0 to 1).
fit.CI.show
Show 95% confidence interval.
fit.CI.colors
Character; a vector containing one or more colors specified as hex codes.
fit.CI.opacity
Opacity of confidence interval ribbon as an alpha value (0 to 1).
legend.show
is the toggle to show the legend. Can be logical or "Automatic", "Show" or "Hide".
When automatic, the legend is only shown when there is more than one group. Defaults to TRUE.
When FALSE or "Hide", the colorscale and bubble legends are also hidden
(if not overridden by their own "show" parameters).
legend.orientation
Character; One of 'Vertical' or 'Horizontal'
legend.wrap
Logical; whether the legend text should be wrapped.
legend.wrap.nchar
Number of characters (approximately) in each
line of the legend when legend.wrap TRUE.
global.font.family
Character; font family for all occurrences of any
font attribute for the chart unless specified individually.
global.font.color
Global font color as a named color in character format
(e.g. "black") or an a hex code.
title
Character; chart title.
title.font.family
Character; title font family. Can be "Arial Black",
"Arial", "Comic Sans MS", "Courier New", "Georgia", "Impact",
"Lucida Console", "Lucida Sans Unicode", "Marlett", "Symbol", "Tahoma",
"Times New Roman", "Trebuchet MS", "Verdana", "Webdings"
title.font.color
Title font color as a named color in character
format (e.g. "black") or a hex code.
title.font.size
Integer; Title font size; default = 10.
subtitle
Character
subtitle.font.family
Character; subtitle font family
subtitle.font.color
subtitle font color as a named color in
character format (e.g. "black") or an a hex code.
subtitle.font.size
Integer; subtitle font size
panel.title.font.family
Font family of panel titles.
panel.title.font.color
Font color of panel titles.
panel.title.font.size
Font size of panel titles.
nrows
Integer; Number of rows to arrange the small multiple panels.
share.axes
Force range of the plot to be the same across all panels.
x.order
A vector containing the list index of the columns in the order
which they are to be shown, or a string with comma separated indices.
panel.x.gap
A number between 0 and 1. Controls the horizontal space between panels.
panel.y.gap
A number between 0 and 1. Controls the vertical space between panels.
footer
Character
footer.font.family
Character; footer font family
footer.font.color
footer font color as a named color in
character format (e.g. "black") or an a hex code.
footer.font.size
Integer; footer font size
footer.wrap
Logical; whether the footer text should be wrapped.
footer.wrap.nchar
Number of characters (approximately) in each
line of the footer when footer.wrap TRUE.
data.label.font.family
Character; font family for data label.
data.label.font.color
Font color as a named color
in character format (e.g. "black") or an a hex code. This can be a single
color, a vector of colors (1 for each series/column), or a comma separated list
of colors
data.label.font.autocolor
Boolean; If true, data.label.font.color is ignored and labels are colored
according to the series color.
data.label.font.size
Integer; Font size for data label.px.
data.label.format
A string representing a d3 formatting code.
See https://github.com/mbostock/d3/wiki/Formatting#numbers
data.label.prefix
Character; prefix for data values.
data.label.suffix
Character; suffix for data values.
opacity
of scatter point colors as an alpha value (0 to 1).
background.fill.color
Background color in character format (e.g. "black") or a hex code.
charting.area.fill.color
Charting area background color as
a named color in character format (e.g. "black") or a hex code.
legend.font.color
Legend font color as a named color in character
format (e.g. "black") or a hex code.
legend.font.family
Character; legend font family.
legend.font.size
Integer; Legend font size.
legend.position.y
A numeric controlling the position of the legend.
Values range from 0 (bottom) to 1 (top).
legend.position.x
A numeric controlling the position of the legend.
Values range from -0.5 (left) to 1.5 (right).
legend.title
Title to show above the legend (and color scale bar)
legend.title.font.color
Font color of the legend (and color scale bar) title
legend.title.font.family
Font family of the legend (and color scale bar) title
legend.title.font.size
Font size of the legend (and color scale bar) title
legend.title.wrap
Whether to wrap the legend (and color scale bar) title
legend.title.wrap.nchar
The number of characters before wrapping the legend (and color scale bar) title
legend.bubble.title
Title to show above the bubble legend
legend.bubble.font.color
Font color of the bubble legend
legend.bubble.font.family
Font family of the bubble legend
legend.bubble.font.size
Font size of the bubble legend
legend.bubble.title.font.color
Font color of the bubble legend title
legend.bubble.title.font.family
Font family of the bubble legend title
legend.bubble.title.font.size
Font size of the bubble legend title
legend.bubble.title.wrap
Whether to wrap the bubble legend title
legend.bubble.title.wrap.nchar
The number of characters before wrapping the bubble legend title
margin.autoexpand
Logical; Whether extra space can be added to the margins
to allow space for axis/legend/data labels or other chart elements.
margin.top
Margin between plot area and the top of the graphic in pixels
margin.bottom
Margin between plot area and the bottom of the graphic in pixels
margin.left
Margin between plot area and the left of the graphic in pixels
margin.right
Margin between plot area and the right of the graphic in pixels
grid.show
Logical; whether to show grid lines.
y.title
Character, y-axis title; defaults to chart input values;
to turn off set to "FALSE".
y.title.font.color
y-axis title font color as a named color in
character format (e.g. "black") or a hex code.
y.title.font.family
Character; y-axis title font family
y.title.font.size
Integer; y-axis title font size
y.line.width
y-axis line width in pixels (0 = no line).
y.line.color
y-axis line color as a named color in character format
(e.g. "black") or a hex code.
y.tick.mark.length
Length of tick marks in pixels. Ticks are only shown when y.line.width > 0.
y.tick.mark.color
Color of tick marks (default transparent).
y.bounds.minimum
Minimum of range for plotting; For a date axis this should be supplied as a date string.
For a categorical axis, the index of the category (0-based) should be used.
y.bounds.maximum
Maximum of range for plotting; NULL = no manual range set.
y.tick.distance
Distance between tick marks. Requires that y.bounds.minimum and y.bounds.maximum have been set.
y.tick.maxnum
Maximum number of ticks shown on the axis.
This setting is ignored if y.tick.distance is set or
if the axis is categorical
y.zero.line.width
Width in pixels of zero line;
y.zero.line.color
Color of horizontal zero line as a named
color in character format (e.g. "black") or an rgb value (e.g.
rgb(0, 0, 0, maxColorValue = 255)).
y.zero.line.dash
Line type of y zero line. Can be one of 'Solid', 'Dot', 'Dash'.
y.grid.width
Width of y-grid lines in pixels; 0 = no line
y.grid.color
Color of y-grid lines as a named color in character
format (e.g. "black") or a hex code.
y.grid.dash
Line type of y grid line. Can be one of 'Solid', 'Dot', 'Dash'.
y.tick.show
Whether to display the y-axis tick labels
y.tick.suffix
y-axis tick label suffix
y.tick.prefix
y-axis tick label prefix
y.tick.format
A string representing a d3 formatting code.
See https://github.com/d3/d3/blob/master/API.md#number-formats-d3-format
y.hovertext.format
A string representing a d3 formatting code
See https://github.com/d3/d3/blob/master/API.md#number-formats-d3-format
y.tick.font.color
y-axis tick label font color as a named color
in character format (e.g. "black") or an a hex code.
y.tick.font.family
Character; y-axis tick label font family
y.tick.font.size
Integer; y-axis tick label font size
x.title
Character, x-axis title; defaults to chart input values;
to turn off set to "FALSE".
x.title.font.color
x-axis title font color as a named color in
character format (e.g. "black") or an a hex code.
x.title.font.family
Character; x-axis title font family
x.title.font.size
Integer; x-axis title font size
x.line.width
x-axis line in pixels, 0 = no line
x.line.color
x-axis line color as a named color in character format
(e.g. "black") or a hex code.
x.tick.mark.length
Length of tick marks in pixels.
x.tick.mark.color
Color of tick marks.
x.bounds.minimum
Minimum of range for plotting; For a date axis this should be supplied as a date string.
For a categorical axis, the index of the category (0-based) should be used.
x.bounds.maximum
Maximum of range for
plotting; NULL = no manual range set. Must be greater than x.bounds.minimum
x.tick.distance
Tick mark distance in
x-axis units between minimum and maximum for plotting; NULL = no manual
range set.
x.tick.maxnum
Maximum number of ticks shown on the axis.
It defaults to 11 which gives the same output from plotly as NULL.
This setting is ignored if x.tick.distance is set or
if the axis is categorical
x.zero.line.width
Width in pixels of zero line.
x.zero.line.color
Color of horizontal zero (origin) line as a named
color in character format (e.g. "black") or an rgb value (e.g.
rgb(0, 0, 0, maxColorValue = 255)).
x.zero.line.dash
Line type of x zero line. Can be one of 'Solid', 'Dot', 'Dash'.
x.grid.width
Width of y-grid lines in pixels; 0 = no line
x.grid.color
Color of y-grid lines as a named color in character
format (e.g. "black") or a hex code.
x.grid.dash
Line type of x grid line. Can be one of 'Solid', 'Dot', 'Dash'.
x.tick.show
Whether to display the x-axis tick labels
x.tick.suffix
x-axis tick label suffix
x.tick.prefix
x-axis tick label prefix
x.tick.format
A string representing a d3 formatting code.
See https://github.com/mbostock/d3/wiki/Formatting#numbers
x.hovertext.format
A string representing a d3 formatting code.
See https://github.com/mbostock/d3/wiki/Formatting#numbers
x.tick.angle
x-axis tick label angle in degrees.
90 = vertical; 0 = horizontal
x.tick.font.color
X-axis tick label font color as a named color in
character format (e.g. "black") or an a hex code.
x.tick.font.family
Character; x-axis tick label font family
x.tick.font.size
Integer; x-axis tick label font size
x.tick.label.wrap
Logical; whether to wrap long labels on the x-axis.
x.tick.label.wrap.nchar
Integer; number of characters in each line when label.wrap is TRUE.
hovertext.font.family
Font family of hover text.
hovertext.font.size
Font size of hover text.
marker.size
Size in pixels of marker. This is overriden
if scatter.sizes is provided, but used for the legend
if scatter.colors.as.categorical.
swap.x.and.y
Swap the x and y axis around on the chart.
legend.bubbles.show
Logical; show legend for bubble sizes.
color.scale.show
is the toggle to show the color scale bar.
label.auto.placement
Logical; whether the scatter plot labels are positioned automatically
to reduce overlap.
quadrants.show
Whether to show quadrants (including midpoint lines)
x.midpoint.type
One of "Average", "Median", "Calculation" or "Value"
x.midpoint.input
Input when "Calculation" is selected for x.midpoint.type
x.midpoint.value
Value when "Value" is selected for x.midpoint.type.
Can be numeric or string of a number.
y.midpoint.type
One of "Average", "Median", "Calculation" or "Value"
y.midpoint.input
Input when "Calculation" is selected for y.midpoint.type
y.midpoint.value
Value when "Value" is selected for y.midpoint.type.
Can be numeric or string of a number.
x.midpoint.line.color
x midpoint line color
x.midpoint.line.dash
x midpoint line type. Can be one of 'Solid', 'Dot', 'Dash'
x.midpoint.line.width
x midpoint line width in pixels
y.midpoint.line.color
y midpoint line color
y.midpoint.line.dash
y midpoint line type. Can be one of 'Solid', 'Dot', 'Dash'
y.midpoint.line.width
y midpoint line width in pixels
quadrant.top.left.color
Color of the top left quadrant
quadrant.top.right.color
Color of the top right quadrant
quadrant.bottom.left.color
Color of the bottom left quadrant
quadrant.bottom.right.color
Color of the bottom right quadrant
quadrant.top.left.title
Title to show for the top left quadrant
quadrant.top.left.title.font.family
Font family of the top left quadrant title
quadrant.top.left.title.font.color
Font color of the top left quadrant title
quadrant.top.left.title.font.size
Font size of the top left quadrant title
quadrant.top.right.title
Title to show for the top right quadrant
quadrant.top.right.title.font.family
Font family of the top right quadrant title
quadrant.top.right.title.font.color
Font color of the top right quadrant title
quadrant.top.right.title.font.size
Font size of the top right quadrant title
quadrant.bottom.left.title
Title to show for the bottom left quadrant
quadrant.bottom.left.title.font.family
Font family of the bottom left quadrant title
quadrant.bottom.left.title.font.color
Font color of the bottom left quadrant title
quadrant.bottom.left.title.font.size
Font size of the bottom left quadrant title
quadrant.bottom.right.title
Title to show for the bottom right quadrant
quadrant.bottom.right.title.font.family
Font family of the bottom right quadrant title
quadrant.bottom.right.title.font.color
Font color of the bottom right quadrant title
quadrant.bottom.right.title.font.size
Font size of the bottom right quadrant title
plot.border.show
Boolean toggle to show border around plot area.
If this is true, then plot.border.* overrides x.line.* and y.line.*.
plot.border.color
Color of border around plot area (Default is black).
plot.border.width
Width of border around plot area in px (Default is 1).
fixed.aspect
Whether of not to force the x and y axis to be at the same scale. Default to FALSE.
Cannot be guarenteed if any of the axis bounds are set.
Value
an HTML widget for "leaflet" or a "plotly" object.
Examples
z <- structure(c(1L, 2L, 3L, 4L, 5L, 2L, 3L, 4L, 5L, 6L), .Dim = c(5L, 2L),
.Dimnames = list(c("T", "U", "V", "W", "X"), c("A", "B")))
Column(z, type="Stacked Column")
Displayr/flipStandardCharts documentation built on Feb. 28, 2025, 4:36 p.m.
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View source: R/combinedscatterplot.R
| CombinedScatter | R Documentation |
CombinedScatter
Description
Scatter plot (uses rhtmlCombinedScatter)
Usage
CombinedScatter(
x = NULL,
y = NULL,
scatter.x.column = 1,
scatter.y.column = 2,
scatter.labels = NULL,
scatter.labels.name = "",
scatter.sizes = NULL,
scatter.sizes.name = "",
scatter.sizes.column = 3,
scatter.sizes.as.diameter = FALSE,
scatter.colors = NULL,
scatter.colors.name = "",
scatter.colors.column = 4,
scatter.colors.as.categorical = TRUE,
scatter.groups = NULL,
scatter.groups.column = NULL,
scatter.labels.as.hovertext = TRUE,
scatter.max.labels = 50,
scatter.max.groups = 50,
annotation.list = NULL,
colors = ChartColors(12),
trend.lines = FALSE,
logos = NULL,
logo.size = 0.5,
fit.type = "None",
fit.window.size = 3,
fit.ignore.last = FALSE,
fit.line.type = "dot",
fit.line.width = 1,
fit.line.colors = colors,
fit.line.opacity = 1,
fit.CI.show = FALSE,
fit.CI.colors = fit.line.colors,
fit.CI.opacity = 0.4,
legend.show = TRUE,
legend.orientation = "Vertical",
legend.wrap = TRUE,
legend.wrap.nchar = 30,
global.font.family = "Arial",
global.font.color = rgb(44, 44, 44, maxColorValue = 255),
title = "",
title.font.family = global.font.family,
title.font.color = global.font.color,
title.font.size = 16,
subtitle = "",
subtitle.font.family = global.font.family,
subtitle.font.color = global.font.color,
subtitle.font.size = 12,
panel.title.font.family = global.font.family,
panel.title.font.color = global.font.color,
panel.title.font.size = 14,
nrows = 2,
share.axes = TRUE,
x.order = NULL,
panel.x.gap = 0.2,
panel.y.gap = 0.3,
footer = "",
footer.font.family = global.font.family,
footer.font.color = global.font.color,
footer.font.size = 8,
footer.wrap = TRUE,
footer.wrap.nchar = 100,
data.label.font.family = global.font.family,
data.label.font.color = global.font.color,
data.label.font.autocolor = FALSE,
data.label.font.size = 10,
data.label.format = "",
data.label.prefix = "",
data.label.suffix = "",
opacity = NULL,
background.fill.color = "transparent",
charting.area.fill.color = background.fill.color,
legend.font.color = global.font.color,
legend.font.family = global.font.family,
legend.font.size = 10,
legend.position.y = 1,
legend.position.x = 1.02,
legend.title = "",
legend.title.font.color = global.font.color,
legend.title.font.family = global.font.family,
legend.title.font.size = 12,
legend.title.wrap = TRUE,
legend.title.wrap.nchar = 30,
legend.bubble.title = "",
legend.bubble.font.color = global.font.color,
legend.bubble.font.family = global.font.family,
legend.bubble.font.size = 10,
legend.bubble.title.font.color = global.font.color,
legend.bubble.title.font.family = global.font.family,
legend.bubble.title.font.size = 12,
legend.bubble.title.wrap = TRUE,
legend.bubble.title.wrap.nchar = 30,
margin.autoexpand = TRUE,
margin.top = NULL,
margin.bottom = NULL,
margin.left = NULL,
margin.right = NULL,
grid.show = TRUE,
y.title = "",
y.title.font.color = global.font.color,
y.title.font.family = global.font.family,
y.title.font.size = 12,
y.line.width = 0,
y.line.color = rgb(0, 0, 0, maxColorValue = 255),
y.tick.mark.length = 0,
y.tick.mark.color = "transparent",
y.bounds.minimum = NULL,
y.bounds.maximum = NULL,
y.tick.distance = NULL,
y.tick.maxnum = NULL,
y.zero.line.width = 0,
y.zero.line.color = rgb(225, 225, 225, maxColorValue = 255),
y.zero.line.dash = "Dash",
y.grid.width = 1 * grid.show,
y.grid.color = rgb(225, 225, 225, maxColorValue = 255),
y.grid.dash = "Solid",
y.tick.show = TRUE,
y.tick.suffix = "",
y.tick.prefix = "",
y.tick.format = "",
y.hovertext.format = "",
y.tick.font.color = global.font.color,
y.tick.font.family = global.font.family,
y.tick.font.size = 10,
x.title = "",
x.title.font.color = global.font.color,
x.title.font.family = global.font.family,
x.title.font.size = 12,
x.line.width = 0,
x.line.color = rgb(0, 0, 0, maxColorValue = 255),
x.tick.mark.length = 3,
x.tick.mark.color = "transparent",
x.bounds.minimum = NULL,
x.bounds.maximum = NULL,
x.tick.distance = NULL,
x.tick.maxnum = NULL,
x.zero.line.width = 0,
x.zero.line.color = rgb(225, 225, 225, maxColorValue = 255),
x.zero.line.dash = "Dash",
x.grid.width = 1 * grid.show,
x.grid.color = rgb(225, 225, 225, maxColorValue = 255),
x.grid.dash = "Solid",
x.tick.show = TRUE,
x.tick.suffix = "",
x.tick.prefix = "",
x.tick.format = "",
x.hovertext.format = "",
x.tick.angle = NULL,
x.tick.font.color = global.font.color,
x.tick.font.family = global.font.family,
x.tick.font.size = 10,
x.tick.label.wrap = TRUE,
x.tick.label.wrap.nchar = 21,
hovertext.font.family = global.font.family,
hovertext.font.size = 11,
marker.size = 6,
swap.x.and.y = FALSE,
legend.bubbles.show = NULL,
color.scale.show = NULL,
label.auto.placement = TRUE,
quadrants.show = FALSE,
x.midpoint.type = "Average",
x.midpoint.input = NULL,
x.midpoint.value = NULL,
y.midpoint.type = "Average",
y.midpoint.input = NULL,
y.midpoint.value = NULL,
x.midpoint.line.color = rgb(0, 0, 0, maxColorValue = 255),
x.midpoint.line.dash = "Solid",
x.midpoint.line.width = 1,
y.midpoint.line.color = rgb(0, 0, 0, maxColorValue = 255),
y.midpoint.line.dash = "Solid",
y.midpoint.line.width = 1,
quadrant.top.left.color = "transparent",
quadrant.top.right.color = "transparent",
quadrant.bottom.left.color = "transparent",
quadrant.bottom.right.color = "transparent",
quadrant.top.left.title = "",
quadrant.top.left.title.font.family = global.font.family,
quadrant.top.left.title.font.color = global.font.color,
quadrant.top.left.title.font.size = 12,
quadrant.top.right.title = "",
quadrant.top.right.title.font.family = global.font.family,
quadrant.top.right.title.font.color = global.font.color,
quadrant.top.right.title.font.size = 12,
quadrant.bottom.left.title = "",
quadrant.bottom.left.title.font.family = global.font.family,
quadrant.bottom.left.title.font.color = global.font.color,
quadrant.bottom.left.title.font.size = 12,
quadrant.bottom.right.title = "",
quadrant.bottom.right.title.font.family = global.font.family,
quadrant.bottom.right.title.font.color = global.font.color,
quadrant.bottom.right.title.font.size = 12,
plot.border.show = FALSE,
plot.border.color = rgb(0, 0, 0, maxColorValue = 255),
plot.border.width = 1,
fixed.aspect = FALSE
)
Arguments
x |
A numeric vector for the x-axis coordinates (which may be named); or a matrix or datarame; or a list of matrices where each matrix share the same row and column names. |
y |
Optional numeric vector for the y-axis coordinates. Should contain the same number of observations as x. If not provided, will use x instead. |
scatter.x.column |
When |
scatter.y.column |
When |
scatter.labels |
Optional vector for labelling scatter points. This should be the same length as the number of observations in x and y. |
scatter.labels.name |
Character; Used for labelling subtitles and footers. |
scatter.sizes |
Numeric vector determining of the size of each observation. These can alternatively be provided as a column in |
scatter.sizes.name |
Character; Used for labelling footers and legends. |
scatter.sizes.column |
When |
scatter.sizes.as.diameter |
Whether to show the points with diameter (instead of area, which is the default) proportional to the sizes variable. |
scatter.colors |
Numeric, character, or categorical vector determining the color of each observation. These can alternatively be provided as a column in |
scatter.colors.name |
Character; Used for labelling footers. |
scatter.colors.column |
When |
scatter.colors.as.categorical |
Boolean; Whether to treat colors as a categorical groups, or a numeric scale. |
scatter.groups |
A factor of the same length as |
scatter.groups.column |
The column of |
scatter.labels.as.hovertext |
Logical; if TRUE, labels are shown has hovers; otherwise, as a labeled scatterplot. |
scatter.max.labels |
Integer; the maximum number of labels to show on a Labeled Scatterplot. If the number of labels is greater than this parameter, extra labels will be hidden by default but can be toggled on by clicking on the marker. |
scatter.max.groups |
Maximum number of different color categories in data. The is equivalent to the number of enteries in the legend. Increasing this too high may cause performance issues. |
annotation.list |
Optional list of annotations to modify the data labels. |
colors |
A vector of colors to use in the chart. When |
trend.lines |
Boolean indicating whether to plot trend lines for multiple tables. |
logos |
Optional list of images to be used to label scatterplot instead of the row names. This should be input as a comma-seperated list of URLs. |
logo.size |
Numeric controlling the size of the logos. |
fit.type |
Character; type of line of best fit. Can be one of "None", "Linear", "LOESS", "Friedman's super smoother", "Cubic spline", "Moving average", "Centered moving average". |
fit.window.size |
Integer; Use to determine how the average is computed when |
fit.ignore.last |
Logical; whether to ignore the last data point in the fit. |
fit.line.type |
Character; One of "solid", "dot", "dash, "dotdash", or length of dash "2px", "5px". |
fit.line.width |
Numeric; Line width of line of best fit. |
fit.line.colors |
Character; a vector containing one or more colors specified as hex codes. |
fit.line.opacity |
Opacity of trend line as an alpha value (0 to 1). |
fit.CI.show |
Show 95% confidence interval. |
fit.CI.colors |
Character; a vector containing one or more colors specified as hex codes. |
fit.CI.opacity |
Opacity of confidence interval ribbon as an alpha value (0 to 1). |
legend.show |
is the toggle to show the legend. Can be logical or "Automatic", "Show" or "Hide". When automatic, the legend is only shown when there is more than one group. Defaults to TRUE. When FALSE or "Hide", the colorscale and bubble legends are also hidden (if not overridden by their own "show" parameters). |
legend.orientation |
Character; One of 'Vertical' or 'Horizontal' |
legend.wrap |
Logical; whether the legend text should be wrapped. |
legend.wrap.nchar |
Number of characters (approximately) in each
line of the legend when |
global.font.family |
Character; font family for all occurrences of any font attribute for the chart unless specified individually. |
global.font.color |
Global font color as a named color in character format (e.g. "black") or an a hex code. |
title |
Character; chart title. |
title.font.family |
Character; title font family. Can be "Arial Black", "Arial", "Comic Sans MS", "Courier New", "Georgia", "Impact", "Lucida Console", "Lucida Sans Unicode", "Marlett", "Symbol", "Tahoma", "Times New Roman", "Trebuchet MS", "Verdana", "Webdings" |
title.font.color |
Title font color as a named color in character format (e.g. "black") or a hex code. |
title.font.size |
Integer; Title font size; default = 10. |
subtitle |
Character |
subtitle.font.family |
Character; subtitle font family |
subtitle.font.color |
subtitle font color as a named color in character format (e.g. "black") or an a hex code. |
subtitle.font.size |
Integer; subtitle font size |
panel.title.font.family |
Font family of panel titles. |
panel.title.font.color |
Font color of panel titles. |
panel.title.font.size |
Font size of panel titles. |
nrows |
Integer; Number of rows to arrange the small multiple panels. |
share.axes |
Force range of the plot to be the same across all panels. |
x.order |
A vector containing the list index of the columns in the order which they are to be shown, or a string with comma separated indices. |
panel.x.gap |
A number between 0 and 1. Controls the horizontal space between panels. |
panel.y.gap |
A number between 0 and 1. Controls the vertical space between panels. |
footer |
Character |
footer.font.family |
Character; footer font family |
footer.font.color |
footer font color as a named color in character format (e.g. "black") or an a hex code. |
footer.font.size |
Integer; footer font size |
footer.wrap |
Logical; whether the footer text should be wrapped. |
footer.wrap.nchar |
Number of characters (approximately) in each
line of the footer when |
data.label.font.family |
Character; font family for data label. |
data.label.font.color |
Font color as a named color in character format (e.g. "black") or an a hex code. This can be a single color, a vector of colors (1 for each series/column), or a comma separated list of colors |
data.label.font.autocolor |
Boolean; If true, |
data.label.font.size |
Integer; Font size for data label.px. |
data.label.format |
A string representing a d3 formatting code. See https://github.com/mbostock/d3/wiki/Formatting#numbers |
data.label.prefix |
Character; prefix for data values. |
data.label.suffix |
Character; suffix for data values. |
opacity |
of scatter point colors as an alpha value (0 to 1). |
background.fill.color |
Background color in character format (e.g. "black") or a hex code. |
charting.area.fill.color |
Charting area background color as a named color in character format (e.g. "black") or a hex code. |
legend.font.color |
Legend font color as a named color in character format (e.g. "black") or a hex code. |
legend.font.family |
Character; legend font family. |
legend.font.size |
Integer; Legend font size. |
legend.position.y |
A numeric controlling the position of the legend. Values range from 0 (bottom) to 1 (top). |
legend.position.x |
A numeric controlling the position of the legend. Values range from -0.5 (left) to 1.5 (right). |
legend.title |
Title to show above the legend (and color scale bar) |
legend.title.font.color |
Font color of the legend (and color scale bar) title |
legend.title.font.family |
Font family of the legend (and color scale bar) title |
legend.title.font.size |
Font size of the legend (and color scale bar) title |
legend.title.wrap |
Whether to wrap the legend (and color scale bar) title |
legend.title.wrap.nchar |
The number of characters before wrapping the legend (and color scale bar) title |
legend.bubble.title |
Title to show above the bubble legend |
legend.bubble.font.color |
Font color of the bubble legend |
legend.bubble.font.family |
Font family of the bubble legend |
legend.bubble.font.size |
Font size of the bubble legend |
legend.bubble.title.font.color |
Font color of the bubble legend title |
legend.bubble.title.font.family |
Font family of the bubble legend title |
legend.bubble.title.font.size |
Font size of the bubble legend title |
legend.bubble.title.wrap |
Whether to wrap the bubble legend title |
legend.bubble.title.wrap.nchar |
The number of characters before wrapping the bubble legend title |
margin.autoexpand |
Logical; Whether extra space can be added to the margins to allow space for axis/legend/data labels or other chart elements. |
margin.top |
Margin between plot area and the top of the graphic in pixels |
margin.bottom |
Margin between plot area and the bottom of the graphic in pixels |
margin.left |
Margin between plot area and the left of the graphic in pixels |
margin.right |
Margin between plot area and the right of the graphic in pixels |
grid.show |
Logical; whether to show grid lines. |
y.title |
Character, y-axis title; defaults to chart input values; to turn off set to "FALSE". |
y.title.font.color |
y-axis title font color as a named color in character format (e.g. "black") or a hex code. |
y.title.font.family |
Character; y-axis title font family |
y.title.font.size |
Integer; y-axis title font size |
y.line.width |
y-axis line width in pixels (0 = no line). |
y.line.color |
y-axis line color as a named color in character format (e.g. "black") or a hex code. |
y.tick.mark.length |
Length of tick marks in pixels. Ticks are only shown when |
y.tick.mark.color |
Color of tick marks (default transparent). |
y.bounds.minimum |
Minimum of range for plotting; For a date axis this should be supplied as a date string. For a categorical axis, the index of the category (0-based) should be used. |
y.bounds.maximum |
Maximum of range for plotting; NULL = no manual range set. |
y.tick.distance |
Distance between tick marks. Requires that |
y.tick.maxnum |
Maximum number of ticks shown on the axis.
This setting is ignored if |
y.zero.line.width |
Width in pixels of zero line; |
y.zero.line.color |
Color of horizontal zero line as a named color in character format (e.g. "black") or an rgb value (e.g. rgb(0, 0, 0, maxColorValue = 255)). |
y.zero.line.dash |
Line type of y zero line. Can be one of 'Solid', 'Dot', 'Dash'. |
y.grid.width |
Width of y-grid lines in pixels; 0 = no line |
y.grid.color |
Color of y-grid lines as a named color in character format (e.g. "black") or a hex code. |
y.grid.dash |
Line type of y grid line. Can be one of 'Solid', 'Dot', 'Dash'. |
y.tick.show |
Whether to display the y-axis tick labels |
y.tick.suffix |
y-axis tick label suffix |
y.tick.prefix |
y-axis tick label prefix |
y.tick.format |
A string representing a d3 formatting code. See https://github.com/d3/d3/blob/master/API.md#number-formats-d3-format |
y.hovertext.format |
A string representing a d3 formatting code See https://github.com/d3/d3/blob/master/API.md#number-formats-d3-format |
y.tick.font.color |
y-axis tick label font color as a named color in character format (e.g. "black") or an a hex code. |
y.tick.font.family |
Character; y-axis tick label font family |
y.tick.font.size |
Integer; y-axis tick label font size |
x.title |
Character, x-axis title; defaults to chart input values; to turn off set to "FALSE". |
x.title.font.color |
x-axis title font color as a named color in character format (e.g. "black") or an a hex code. |
x.title.font.family |
Character; x-axis title font family |
x.title.font.size |
Integer; x-axis title font size |
x.line.width |
x-axis line in pixels, 0 = no line |
x.line.color |
x-axis line color as a named color in character format (e.g. "black") or a hex code. |
x.tick.mark.length |
Length of tick marks in pixels. |
x.tick.mark.color |
Color of tick marks. |
x.bounds.minimum |
Minimum of range for plotting; For a date axis this should be supplied as a date string. For a categorical axis, the index of the category (0-based) should be used. |
x.bounds.maximum |
Maximum of range for plotting; NULL = no manual range set. Must be greater than x.bounds.minimum |
x.tick.distance |
Tick mark distance in x-axis units between minimum and maximum for plotting; NULL = no manual range set. |
x.tick.maxnum |
Maximum number of ticks shown on the axis.
It defaults to 11 which gives the same output from plotly as NULL.
This setting is ignored if |
x.zero.line.width |
Width in pixels of zero line. |
x.zero.line.color |
Color of horizontal zero (origin) line as a named color in character format (e.g. "black") or an rgb value (e.g. rgb(0, 0, 0, maxColorValue = 255)). |
x.zero.line.dash |
Line type of x zero line. Can be one of 'Solid', 'Dot', 'Dash'. |
x.grid.width |
Width of y-grid lines in pixels; 0 = no line |
x.grid.color |
Color of y-grid lines as a named color in character format (e.g. "black") or a hex code. |
x.grid.dash |
Line type of x grid line. Can be one of 'Solid', 'Dot', 'Dash'. |
x.tick.show |
Whether to display the x-axis tick labels |
x.tick.suffix |
x-axis tick label suffix |
x.tick.prefix |
x-axis tick label prefix |
x.tick.format |
A string representing a d3 formatting code. See https://github.com/mbostock/d3/wiki/Formatting#numbers |
x.hovertext.format |
A string representing a d3 formatting code. See https://github.com/mbostock/d3/wiki/Formatting#numbers |
x.tick.angle |
x-axis tick label angle in degrees. 90 = vertical; 0 = horizontal |
x.tick.font.color |
X-axis tick label font color as a named color in character format (e.g. "black") or an a hex code. |
x.tick.font.family |
Character; x-axis tick label font family |
x.tick.font.size |
Integer; x-axis tick label font size |
x.tick.label.wrap |
Logical; whether to wrap long labels on the x-axis. |
x.tick.label.wrap.nchar |
Integer; number of characters in each line when |
hovertext.font.family |
Font family of hover text. |
hovertext.font.size |
Font size of hover text. |
marker.size |
Size in pixels of marker. This is overriden
if |
swap.x.and.y |
Swap the x and y axis around on the chart. |
legend.bubbles.show |
Logical; show legend for bubble sizes. |
color.scale.show |
is the toggle to show the color scale bar. |
label.auto.placement |
Logical; whether the scatter plot labels are positioned automatically to reduce overlap. |
quadrants.show |
Whether to show quadrants (including midpoint lines) |
x.midpoint.type |
One of "Average", "Median", "Calculation" or "Value" |
x.midpoint.input |
Input when "Calculation" is selected for x.midpoint.type |
x.midpoint.value |
Value when "Value" is selected for x.midpoint.type. Can be numeric or string of a number. |
y.midpoint.type |
One of "Average", "Median", "Calculation" or "Value" |
y.midpoint.input |
Input when "Calculation" is selected for y.midpoint.type |
y.midpoint.value |
Value when "Value" is selected for y.midpoint.type. Can be numeric or string of a number. |
x.midpoint.line.color |
x midpoint line color |
x.midpoint.line.dash |
x midpoint line type. Can be one of 'Solid', 'Dot', 'Dash' |
x.midpoint.line.width |
x midpoint line width in pixels |
y.midpoint.line.color |
y midpoint line color |
y.midpoint.line.dash |
y midpoint line type. Can be one of 'Solid', 'Dot', 'Dash' |
y.midpoint.line.width |
y midpoint line width in pixels |
quadrant.top.left.color |
Color of the top left quadrant |
quadrant.top.right.color |
Color of the top right quadrant |
quadrant.bottom.left.color |
Color of the bottom left quadrant |
quadrant.bottom.right.color |
Color of the bottom right quadrant |
quadrant.top.left.title |
Title to show for the top left quadrant |
quadrant.top.left.title.font.family |
Font family of the top left quadrant title |
quadrant.top.left.title.font.color |
Font color of the top left quadrant title |
quadrant.top.left.title.font.size |
Font size of the top left quadrant title |
quadrant.top.right.title |
Title to show for the top right quadrant |
quadrant.top.right.title.font.family |
Font family of the top right quadrant title |
quadrant.top.right.title.font.color |
Font color of the top right quadrant title |
quadrant.top.right.title.font.size |
Font size of the top right quadrant title |
quadrant.bottom.left.title |
Title to show for the bottom left quadrant |
quadrant.bottom.left.title.font.family |
Font family of the bottom left quadrant title |
quadrant.bottom.left.title.font.color |
Font color of the bottom left quadrant title |
quadrant.bottom.left.title.font.size |
Font size of the bottom left quadrant title |
quadrant.bottom.right.title |
Title to show for the bottom right quadrant |
quadrant.bottom.right.title.font.family |
Font family of the bottom right quadrant title |
quadrant.bottom.right.title.font.color |
Font color of the bottom right quadrant title |
quadrant.bottom.right.title.font.size |
Font size of the bottom right quadrant title |
plot.border.show |
Boolean toggle to show border around plot area.
If this is true, then |
plot.border.color |
Color of border around plot area (Default is black). |
plot.border.width |
Width of border around plot area in px (Default is 1). |
fixed.aspect |
Whether of not to force the x and y axis to be at the same scale. Default to FALSE. Cannot be guarenteed if any of the axis bounds are set. |
Value
an HTML widget for "leaflet" or a "plotly" object.
Examples
z <- structure(c(1L, 2L, 3L, 4L, 5L, 2L, 3L, 4L, 5L, 6L), .Dim = c(5L, 2L),
.Dimnames = list(c("T", "U", "V", "W", "X"), c("A", "B")))
Column(z, type="Stacked Column")
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