CoCo: Generate a vector of co-occurrence counts from an occurrence...

In ECGen/ComGenR: Functions for COMmunity GENetics analyses in R

Description

Models and plots a network model using the methods of Araujo et al. 2011.

Usage

CoCo(x, type = c("pos", "neg"))

Arguments

x	Community matrix with species in columns.
type	Type of co-occurrence count matrix to return.

Value

Returns either co-occurrences (pos) or checkers (neg) counts for all unique non-recursive species pairs

Author(s)

Matthew K. Lau

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

ECGen/ComGenR documentation built on July 23, 2021, 11:44 p.m.