setupPlate: setupPlate

Description Arguments Value Author(s)

Description

Sets up the CIMseqSwarm object for the known argument to the checkResults function.

Arguments

plateData

tibble; Includes the columns row, column, multipletName, multipletComposition, connections where row and column includes a letter or numerical value, respectivley, indicating the index in the plate of each multiplet, multipletName corresponds to the name of the multiplet and matches the names in the subsequent detected results, multipletComposition is the cell types included in the multiplet seperated by a "-", and connections is a list for each multiplet containing a matrix with all possible combinations of 2 of the cell types included in the multiplet.

...

additional arguments to pass on

Value

data.frame

Author(s)

Jason T. Serviss


EngeLab/CIMseq.publication documentation built on Jan. 29, 2020, 10:03 a.m.