seeker_pathway_order: seeker_pathway_order
In Erickcufe/seekerBio: Seek gen information in databases
View source: R/seeker_pathway_order.R
seeker_pathway_order R Documentation
seeker_pathway_order
Description
This function order the pathways of reactome into categories
Usage
seeker_pathway_order(pathways)
Arguments
pathways
a data.frame product of the function seeker_gen_pathways()
Value
A column with the classification pathway
Author(s)
Erick Cuevas Fernández
Heriberto Manuel Rivera
Source
https://reactome.org
Examples
df <- data.frame(Gen=c("MMP12","MMP12","MMP12"), ID=c("R-HSA-1442490","R-HSA-1474228","R-HSA-1474244"), Path_name=c("Collagen degradation", "Degradation of the extracellular matrix", "Extracellular matrix organization"))
seeker_pathway_order(df)
Erickcufe/seekerBio documentation built on May 1, 2024, 1:13 a.m.
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View source: R/seeker_pathway_order.R
| seeker_pathway_order | R Documentation |
seeker_pathway_order
Description
This function order the pathways of reactome into categories
Usage
seeker_pathway_order(pathways)
Arguments
pathways |
a data.frame product of the function seeker_gen_pathways() |
Value
A column with the classification pathway
Author(s)
Erick Cuevas Fernández
Heriberto Manuel Rivera
Source
https://reactome.org
Examples
df <- data.frame(Gen=c("MMP12","MMP12","MMP12"), ID=c("R-HSA-1442490","R-HSA-1474228","R-HSA-1474244"), Path_name=c("Collagen degradation", "Degradation of the extracellular matrix", "Extracellular matrix organization"))
seeker_pathway_order(df)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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