importRawData: A function to import the raw calcium imaging data
In FafferMcgee/calcium-analysis:

Description Usage Arguments Details Examples

This function will take the data obtained from ImageJ time-series without normalization. It cleans up the data as well by removing the area and IntDen1 columns. It also renames the columns from RawIntDenx to Cell x.

1	importRawData(file)

file

Path to a csv file that contains the time-series data for multiple cells obtained in ImageJ

The output of the function should be stored as a variable. There are two outputs for this function: One is a standard wide-format that is easy to look at manually. The other is a 'long' format where the intensity data has been gathered under a key for the cell/ROI being analyzed.

CalciumExperiment191 <- importRawData('./Data/Wholeimage_Calcium_Experiment191.csv')

Example of storing data:
wholeNormInt191 <- wholeCalciumExperiment191[[1]]
longWholeNormInt191 <-wholeCalciumExperiment191[[2]]