Description Usage Arguments Value Examples
View source: R/DEA_Consensus_Differential_Expression_Analysis.R
Consensus_Differential_Expression
1 2 3 4 5 6 7 8 | Consensus_Differential_Expression(
Exp,
groups,
methods = "ALL",
adj.method = "BH",
fearture.name = "gene",
center.fun = "mean"
)
|
Exp |
data.frame or matrix with rownames represent samples, colnames represent features like proteins or genes. |
groups |
factor vector indicates group information. In two-way anova, groups are a data.frame, each column indicate one group factor. |
type |
"one-way" or "two-way" anova. |
Consensus_Differential_Expression
One list including all results of Differential Expression analysis \n
DEA_ANOVA
Anova result with pairwised comparation.
1 2 |
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