mia-package: 'mia' Package.
In FelixErnst/mia: Microbiome analysis
mia-package R Documentation
mia Package.
Description
mia implements tools for microbiome analysis based on the
SummarizedExperiment, SingleCellExperiment and
TreeSummarizedExperiment infrastructure. Data wrangling and analysis
in the context of taxonomic data is the main scope. Additional functions for
common task are implemented such as community indices calculation and
summarization.
Author(s)
Maintainer: Tuomas Borman tuomas.v.borman@utu.fi (ORCID)
Authors:
Felix G.M. Ernst felix.gm.ernst@outlook.com (ORCID)
Sudarshan A. Shetty sudarshanshetty9@gmail.com (ORCID)
Leo Lahti leo.lahti@iki.fi (ORCID)
Other contributors:
Yang Cao [contributor]
Nathan D. Olson nolson@nist.gov [contributor]
Levi Waldron [contributor]
Marcel Ramos [contributor]
Héctor Corrada Bravo [contributor]
Jayaram Kancherla [contributor]
Domenick Braccia dbraccia@umd.edu [contributor]
Basil Courbayre [contributor]
Muluh Muluh [contributor]
Giulio Benedetti [contributor]
Moritz Emanuel Beber moritz.beber@igdore.org (ORCID) [contributor]
Nitesh Turaga [contributor]
Chouaib Benchraka [contributor]
Akewak Jeba [contributor]
Himmi Lindgren [contributor]
Noah De Gunst [contributor]
Théotime Pralas [contributor]
Shadman Ishraq [contributor]
Eineje Ameh [contributor]
Artur Sannikov [contributor]
Hervé Pagès [contributor]
Rajesh Shigdel [contributor]
Katariina Pärnänen [contributor]
Pande Erawijantari [contributor]
Danielle Callan [contributor]
See Also
TreeSummarizedExperiment
FelixErnst/mia documentation built on Nov. 18, 2024, 5:02 a.m.
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| mia-package | R Documentation |
mia Package.
Description
mia implements tools for microbiome analysis based on the
SummarizedExperiment, SingleCellExperiment and
TreeSummarizedExperiment infrastructure. Data wrangling and analysis
in the context of taxonomic data is the main scope. Additional functions for
common task are implemented such as community indices calculation and
summarization.
Author(s)
Maintainer: Tuomas Borman tuomas.v.borman@utu.fi (ORCID)
Authors:
Felix G.M. Ernst felix.gm.ernst@outlook.com (ORCID)
Sudarshan A. Shetty sudarshanshetty9@gmail.com (ORCID)
Leo Lahti leo.lahti@iki.fi (ORCID)
Other contributors:
Yang Cao [contributor]
Nathan D. Olson nolson@nist.gov [contributor]
Levi Waldron [contributor]
Marcel Ramos [contributor]
Héctor Corrada Bravo [contributor]
Jayaram Kancherla [contributor]
Domenick Braccia dbraccia@umd.edu [contributor]
Basil Courbayre [contributor]
Muluh Muluh [contributor]
Giulio Benedetti [contributor]
Moritz Emanuel Beber moritz.beber@igdore.org (ORCID) [contributor]
Nitesh Turaga [contributor]
Chouaib Benchraka [contributor]
Akewak Jeba [contributor]
Himmi Lindgren [contributor]
Noah De Gunst [contributor]
Théotime Pralas [contributor]
Shadman Ishraq [contributor]
Eineje Ameh [contributor]
Artur Sannikov [contributor]
Hervé Pagès [contributor]
Rajesh Shigdel [contributor]
Katariina Pärnänen [contributor]
Pande Erawijantari [contributor]
Danielle Callan [contributor]
See Also
TreeSummarizedExperiment
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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