formatBlat: Function to format BLAT output
In Fraternalilab/BrepConvert: BrepConvert: R package for gene conversion analysis of B cell repertoire
formatBlat R Documentation
Function to format BLAT output
Description
Function to format BLAT output
Usage
formatBlat(tb, adjustment = 6)
Arguments
tb
data.frame, output from the blat function.
adjustment
integer, the number of nucleotides which flank the gene conversion events (included for BLAT just to facilitate the alignment to look for seeds). This needs to be taken into account to re-adjust the actual start and end point of conversion events. (default: 6)
Fraternalilab/BrepConvert documentation built on Oct. 14, 2022, 5:54 p.m.
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| formatBlat | R Documentation |
Function to format BLAT output
Description
Function to format BLAT output
Usage
formatBlat(tb, adjustment = 6)
Arguments
tb |
data.frame, output from the |
adjustment |
integer, the number of nucleotides which flank the gene conversion events (included for BLAT just to facilitate the alignment to look for seeds). This needs to be taken into account to re-adjust the actual start and end point of conversion events. (default: 6) |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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