irn_plot: Inter system recurrence networks

In FredHasselman/casnet: A Toolbox for Studying Complex Adaptive Systems and Networks

Inter system recurrence networks

Description

Inter system recurrence networks

Usage

irn_plot(
  RMxy,
  gx = NULL,
  gy = NULL,
  merge_seed = 5,
  curvature = 0,
  angle = 0,
  scaleEdgeSize = 1,
  alphaE = 0.1,
  alphaV = 1,
  colorExy = "grey30",
  colorEyx = "grey70",
  sizeEbyCC = FALSE,
  doPlot = TRUE,
  ggplotReturn = FALSE,
  igraphReturn = FALSE
)

Arguments

RMxy	A cross recurrence matrix of x and y
gx	An igraph object of recurrence network x
gy	An igraph object of recurrence network y
merge_seed	Seed
curvature	The curvature parameter for edges see geom_curve() (default = -0.7)
angle	The angle parameter for edges see geom_curve() (default = 90)
scaleEdgeSize	Scale the size of the edges by a constant: E(g)$width * scaleEdgeSize (default = 1/5)
alphaE	Set transparency for Edges. A single numeric, or a vector of length ecount(g) (default = 0.8)
alphaV	Set transparency for Vertices (default = 1)
colorExy	Edge colour x >> y
colorEyx	Edge colour y >> x
sizeEbyCC	Node size by Clustering Coefficient
doPlot	Produce a plot? (default = TRUE)
ggplotReturn	returns the ggplot object (default = FALSE)
igraphReturn	returns the intermediate iGraph object. This will not look the same as the final graph, but has most of the attributes, like edge and vertex colors and spiral layout (default = FALSE)

Value

A plot

FredHasselman/casnet documentation built on Jan. 6, 2025, 3:18 a.m.