Files in GaoLabXDU/CEPICS
CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping
.gitattributes
.gitignore
CEPIM.Rproj
DESCRIPTION
LICENSE
NAMESPACE
R/CEPICS.R
R/COAD_Methy.R
R/COAD_cnv.R
R/COAD_mRNA.R
R/COAD_miRNA.R
R/KMSURDATA.R
R/PFAinit.R
R/Res.R
R/affinity.R
R/calARI.R
R/calNMI.R
R/calRI.R
R/calSI.R
R/chooseDimension.R
R/drawBarRmd.R
R/drawHeatmap.R
R/drawHeatmapRmd.R
R/drawKMcurve.R
R/drawPvalues.R
R/drawtable_all_eval.R
R/drawtime.R
R/drawzmat.R
R/evaluateRes.R
R/filterData.R
R/formatData.R
R/getOverlap.R
R/h.R
R/imputeData.R
R/insertPicture.R
R/joinOverlap.R
R/kmeansn.R
R/normData.R
R/outputReport.R
R/renameByOrder.R
R/runLRA.R
R/runPFA.R
R/runPINSPlus.R
R/runSNF.R
R/runiClusterBayes.R
R/sampleClusterFig.R
R/saveKMCurveData.R
R/selectFeature.R
R/selectev.R
R/splitFilename.R
R/truelabel.R
R/writeCode.R
R/writeData.R
R/writeHeader.R
R/writeRmd.R
README.md
data/COAD_Methy.rda
data/COAD_cnv.rda
data/COAD_mRNA.rda
data/COAD_miRNA.rda
data/KMSURDATA.rda
data/Res.rda
data/datalist
data/truelabel.rda
documents/CEPICS_Supplementary_materials.zip
documents/init.R
documents/pic/4me.png
documents/pic/ARI.png
documents/pic/Comparison.png
documents/pic/CoxPvalue.png
documents/pic/KM.png
documents/pic/NMI.png
documents/pic/SI.png
documents/pic/SamplesSimilarity.png
documents/pic/TimeConsumption.png
documents/pic/avg.png
documents/pic/cmp.png
documents/pic/heatmap.png
documents/pic/metrics.png
man/CEPICS.Rd
man/COAD_Methy.Rd
man/COAD_cnv.Rd
man/COAD_mRNA.Rd
man/COAD_miRNA.Rd
man/KMSURDATA.Rd
man/PFAinit.Rd
man/Res.Rd
man/calARI.Rd
man/calNMI.Rd
man/calRI.Rd
man/calSI.Rd
man/filterData.Rd
man/formatData.Rd
man/getOverlap.Rd
man/imputeData.Rd
man/normData.Rd
man/runLRA.Rd
man/runPFA.Rd
man/runPINSPlus.Rd
man/runSNF.Rd
man/runiClusterBayes.Rd
man/selectFeature.Rd
man/truelabel.Rd
