Man pages for GaoLabXDU/CEPICS
CEPICS: a comparison and evaluation platform for integration methods in cancer subtyping
| calARI | Calculate Adjusted Rand Index |
| calNMI | Calculate the Normalized Mutual Information |
| calRI | Calculate Rand Index |
| calSI | Calculate the Silhouette Coefficient of the result of a... |
| CEPICS | CEPICS: a comparison and evaluation platform for integration... |
| COAD_cnv | A Copy Number Variations dataset of COAD. |
| COAD_Methy | A DNA methylation dataset of COAD. |
| COAD_miRNA | A microRNA dataset of COAD |
| COAD_mRNA | A message RNA dataset of COAD |
| filterData | Filter Data |
| formatData | Format Data |
| getOverlap | Get the overlap samples of datasets. |
| imputeData | Impute the missing values of Data. |
| KMSURDATA | Clinical Survival Data of five TCGA cancers. |
| normData | Normalize Data |
| PFAinit | Initialize a MATLAB server |
| Res | An example result of our own method. |
| runiClusterBayes | Run the iClusterBayes method |
| runLRA | Run LRAcluster to get the subtyping results. |
| runPFA | Run PFA method to get the subtyping results. |
| runPINSPlus | Run PINSPlus method to get the subtyping results. |
| runSNF | Run SNF method to get the subtyping results. |
| selectFeature | Select features of dataset |
| truelabel | the truelabels of COAD samples |
