Files in GenEpi-GenPhySE/epistack
Heatmaps of Stack Profiles from Epigenetic Signals
.Rbuildignore
.gitignore
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/GRanges2RSE.R
R/addBins.R
R/addMetricAndArrangeGRanges.R
R/addMetricAndArrangeRSE.R
R/meanColor.R
R/plotAverageProfile.R
R/plotBinning.R
R/plotBoxMetric.R
R/plotEpistack.R
R/plotMetric.R
R/plotStackProfile.R
R/plotStackProfileLengend.R
R/redimMatrix.R
R/stackepi.R
R/stackepi_gr.R
README.md
data/stackepi.rda
data/stackepi_gr.rda
inst/CITATION
inst/epistack.R
man/GRanges2RSE.Rd
man/addBins.Rd
man/addMetricAndArrangeGRanges.Rd
man/addMetricAndArrangeRSE.Rd
man/meanColor.Rd
man/plotAverageProfile.Rd
man/plotBinning.Rd
man/plotBoxMetric.Rd
man/plotEpistack.Rd
man/plotMetric.Rd
man/plotStackProfile.Rd
man/plotStackProfileLegend.Rd
man/redimMatrix.Rd
man/stackepi.Rd
man/stackepi_gr.Rd
tests/testthat.R
tests/testthat/_snaps/plotAverageProfile/plotaverageprofile-defauls.svg
tests/testthat/_snaps/plotAverageProfile/plotaverageprofile-granges.svg
tests/testthat/_snaps/plotAverageProfile/plotaverageprofile-y-title.svg
tests/testthat/_snaps/plotBinning/plotbin-custom.svg
tests/testthat/_snaps/plotBinning/plotbin-default.svg
tests/testthat/_snaps/plotBinning/plotbin-granges.svg
tests/testthat/_snaps/plotBoxMetric/plotboxmetric-bins.svg
tests/testthat/_snaps/plotBoxMetric/plotboxmetric-default.svg
tests/testthat/_snaps/plotBoxMetric/plotboxmetric-granges.svg
tests/testthat/_snaps/plotEpistack/epistack-tiny-matrix.svg
tests/testthat/_snaps/plotEpistack/plotepistack-granges.svg
tests/testthat/_snaps/plotEpistack/plotepistack-log10-tran.svg
tests/testthat/_snaps/plotEpistack/plotepistack-main-title.svg
tests/testthat/_snaps/plotEpistack/plotepistack-reversed-z-order.svg
tests/testthat/_snaps/plotEpistack/plotepistack-with-bins.svg
tests/testthat/_snaps/plotEpistack/plotepistack-y-axis-title.svg
tests/testthat/_snaps/plotMetric/plotmetric-default.svg
tests/testthat/_snaps/plotStackProfile/stack-profile-default.svg
tests/testthat/_snaps/plotStackProfile/stack-profile-granges.svg
tests/testthat/test_GRanges2RSE.R
tests/testthat/test_addBins.R
tests/testthat/test_addMetricAndArrangeGRanges.R
tests/testthat/test_addMetricAndArrangeRSE.R
tests/testthat/test_meanColors.R
tests/testthat/test_plotAverageProfile.R
tests/testthat/test_plotBinning.R
tests/testthat/test_plotBoxMetric.R
tests/testthat/test_plotEpistack.R
tests/testthat/test_plotMetric.R
tests/testthat/test_plotStackProfile.R
tests/testthat/test_redim_matrix.R
vignettes/.gitignore
vignettes/example_vizbi_bos_epistack2.png
vignettes/using_epistack.Rmd
