prepareMiDAS_hla_aa: Prepare MiDAS data on HLA amino acid level

View source: R/class.R

prepareMiDAS_hla_aaR Documentation

Prepare MiDAS data on HLA amino acid level

Description

Prepare MiDAS data on HLA amino acid level

Usage

prepareMiDAS_hla_aa(hla_calls, indels = TRUE, unkchar = FALSE, ...)

Arguments

hla_calls

HLA calls data frame, as returned by readHlaCalls function.

indels

Logical indicating whether indels should be considered when checking variability.

unkchar

Logical indicating whether unknown characters in the alignment should be considered when checking variability.

...

Not used

Value

SummarizedExperiment


Genentech/MiDAS documentation built on Feb. 5, 2024, 11:52 a.m.