plotTFs2Exprs: Plot the beta value of TF and related target genes expression

In GianlucaMattei/methyl.O: Annotate, Score and Visualize Differentially Methylated Regions

Plot the beta value of TF and related target genes expression

Description

Barplot of the beta value of TF and the expression of the target genes

Usage

plotTFs2Exprs(
  associatedTFs2Expr,
  symbol,
  col.meth = "#8e0000",
  pals.bars = "Cold"
)

Arguments

associatedTFs2Expr	data.frame, results from associateTFs2Exprs().
symbol	character, feature to correlate. Must be from names of resulting list from annotateDMRs. Additional feature names can be first exons (exons1) or first intron (intron1). To use more than one feature use c().
col.meth	character, color for beta value. Defaut = "#8e0000" (red)
pals.bars	character, palette for gene expresion. hcl.pals() to show available. Default = "Cold"

Value

plot showing methylation levels of TF and expresion of target genes

GianlucaMattei/methyl.O documentation built on Sept. 12, 2023, 11:53 p.m.