extendGR: Extend regions from a Genomic Ranges object
In GreenleafLab/ArchR: Analyzing single-cell regulatory chromatin in R.
extendGR R Documentation
Extend regions from a Genomic Ranges object
Description
This function extends each region in a Genomic Ranges object by a designated upstream and downstream extension in a strand-aware fashion
Usage
extendGR(gr = NULL, upstream = NULL, downstream = NULL)
Arguments
gr
A GRanges object.
upstream
The number of basepairs upstream (5') to extend each region in gr in a strand-aware fashion.
downstream
The number of basepairs downstream (3') to extend each region in gr in a strand-aware fashion.
GreenleafLab/ArchR documentation built on Feb. 28, 2024, 4:17 p.m.
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| extendGR | R Documentation |
Extend regions from a Genomic Ranges object
Description
This function extends each region in a Genomic Ranges object by a designated upstream and downstream extension in a strand-aware fashion
Usage
extendGR(gr = NULL, upstream = NULL, downstream = NULL)
Arguments
gr |
A |
upstream |
The number of basepairs upstream (5') to extend each region in |
downstream |
The number of basepairs downstream (3') to extend each region in |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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