getTutorialData: Get Relevant Data For ArchR Tutorials

In GreenleafLab/ArchR: Analyzing single-cell regulatory chromatin in R.

Get Relevant Data For ArchR Tutorials

Description

This function will download data for a given tutorial and return the input files required for ArchR.

Usage

getTutorialData(tutorial = "hematopoiesis", threads = getArchRThreads())

Arguments

tutorial	The name of the available tutorial for which to retreive the tutorial data. Currently, the only available option is "Hematopoiesis". "Hematopoiesis" is a small scATAC-seq dataset that spans the hematopoieitic hierarchy from stem cells to differentiated cells. This dataset is made up of cells from peripheral blood, bone marrow, and CD34+ sorted bone marrow.
threads	The number of threads to be used for parallel computing.

GreenleafLab/ArchR documentation built on Feb. 28, 2024, 4:17 p.m.