getValidBarcodes: Get Valid Barcodes from 10x Cell Ranger output to pre-filter...
In GreenleafLab/ArchR: Analyzing single-cell regulatory chromatin in R.
getValidBarcodes R Documentation
Get Valid Barcodes from 10x Cell Ranger output to pre-filter barcodes
Description
This function will read in processed 10x cell ranger files and identify barcodes that are associated with a cell that passed QC.
Usage
getValidBarcodes(csvFiles = NULL, sampleNames = NULL)
Arguments
csvFiles
A character vector of names from 10x CSV files to be read in for identification of valid cell barcodes.
sampleNames
A character vector containing the sample names to be associated with each individual entry in csvFiles.
GreenleafLab/ArchR documentation built on Feb. 28, 2024, 4:17 p.m.
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| getValidBarcodes | R Documentation |
Get Valid Barcodes from 10x Cell Ranger output to pre-filter barcodes
Description
This function will read in processed 10x cell ranger files and identify barcodes that are associated with a cell that passed QC.
Usage
getValidBarcodes(csvFiles = NULL, sampleNames = NULL)
Arguments
csvFiles |
A character vector of names from 10x CSV files to be read in for identification of valid cell barcodes. |
sampleNames |
A character vector containing the sample names to be associated with each individual entry in |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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