loadArchRProject: Load Previous ArchRProject into R
In GreenleafLab/ArchR: Analyzing single-cell regulatory chromatin in R.

loadArchRProject

R Documentation

Load Previous ArchRProject into R

Description

This function will load a previously saved ArchRProject and re-normalize paths for usage.

Usage

loadArchRProject(path = "./", force = FALSE, showLogo = TRUE)

Arguments

`path`	A character path to an `ArchRProject` directory that was previously saved using `saveArchRProject()`.
`force`	A boolean value indicating whether missing optional `ArchRProject` components (i.e. peak annotations / background peaks) should be ignored when re-normalizing file paths. If set to `FALSE` loading of the `ArchRProject` will fail unless all components can be found.
`showLogo`	A boolean value indicating whether to show the ascii ArchR logo after successful creation of an `ArchRProject`.

Examples


# Get Small PBMC Project Location
zipProj <- file.path(system.file("testdata", package="ArchR"), "PBSmall.zip")

# Copy to current directory
file.copy(zipProj, basename(zipProj), overwrite = TRUE)

# Unzip
unzip(basename(zipProj), overwrite = TRUE)

# Remove
file.remove(basename(zipProj))

# Load
loadArchRProject("PBSmall")

GreenleafLab/ArchR documentation built on Feb. 21, 2025, 3:05 p.m.