API for GreenwoodLab/funtooNorm
Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit
| Global functions | |
|---|---|
| SampleSet-class | Man page |
| agreement | Man page Source code |
| buildQuantileList | Source code |
| calcBeta | Source code |
| constructProbCovMat | Source code |
| fromGenStudFiles | Man page Source code |
| fromRGChannelSet | Man page Source code |
| funtooNorm | Man page |
| funtooNorm,SampleSet-method | Man page |
| funtooNorm-package | Man page |
| funtooNormApply | Source code |
| getGRanges | Man page |
| getGRanges,SampleSet-method | Man page |
| getNormBeta | Man page |
| getNormBeta,SampleSet-method | Man page |
| getNormM | Man page |
| getNormM,SampleSet-method | Man page |
| getRawBeta | Man page |
| getRawBeta,SampleSet-method | Man page |
| getSnpM | Man page |
| getSnpM,SampleSet-method | Man page |
| plotValidate | Source code |
| plotValidationGraph | Man page |
| plotValidationGraph,SampleSet-method | Man page |
| quantileNormalization | Source code |
| show,SampleSet-method | Man page |
