getGRanges: Build GRange object of methylation probes
In GreenwoodLab/funtooNorm: Normalization Procedure for Infinium HumanMethylation450 BeadChip Kit
getGRanges R Documentation
Build GRange object of methylation probes
Description
Build GRange object of methylation probes
Usage
getGRanges(object)
## S4 method for signature 'SampleSet'
getGRanges(object)
Arguments
object
Object of class SampleSet.
Value
A GRange object of the positions of each cpg.
Methods (by class)
-
SampleSet: Build GRange object of methylation probes
Examples
require(minfiData)
pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
mySampleSet=fromRGChannelSet(RGsetEx)
gr=getGRanges(mySampleSet)
GreenwoodLab/funtooNorm documentation built on April 5, 2022, 3:22 p.m.
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| getGRanges | R Documentation |
Build GRange object of methylation probes
Description
Build GRange object of methylation probes
Usage
getGRanges(object) ## S4 method for signature 'SampleSet' getGRanges(object)
Arguments
object |
Object of class SampleSet. |
Value
A GRange object of the positions of each cpg.
Methods (by class)
-
SampleSet: Build GRange object of methylation probes
Examples
require(minfiData)
pData(RGsetEx)$cell_type <- rep(c("type1","type2"),3)
mySampleSet=fromRGChannelSet(RGsetEx)
gr=getGRanges(mySampleSet)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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