calculate_taxa_habitat_host_features: Intersect habitat suitability feature layers with other...

In HMB3/nenswniche: Rapidly estimate species ranges and intersect with other layers

Intersect habitat suitability feature layers with other feature layer (e.g. Fire).

Description

Takes a habitat suitability layer, and intersects it with a fire suitability layer.

Usage

calculate_taxa_habitat_host_features(
  taxa_list,
  targ_maxent_table,
  host_maxent_table,
  target_path,
  output_path,
  thresh_path,
  host_path,
  intersect_path,
  intersect_patt,
  int_cols,
  thresh_patt,
  main_int_layer,
  second_int_layer,
  template_raster,
  poly_path,
  epsg
)

Arguments

taxa_list	Character string - The taxa to run maxent predictions for
targ_maxent_table	data frame - table of maxent results for target taxa
host_maxent_table	data frame - table of maxent results for host taxa
target_path	Character string - The file path containing the existing maxent models
output_path	Character string - The file path to save the function output
thresh_path	Character string - The file path containing the existing maxent models
host_path	Character string - The file path to save the function output
intersect_path	Character string - The file path containing the intersecting rasters
intersect_patt	Character string - The pattern for the intersect files
int_cols	Character string - List of intersect columns
thresh_patt	Character string - The pattern for the threshold files
main_int_layer	Character string - The pattern for the intersect files
second_int_layer	Character string - The pattern for the intersect files
template_raster	Raster::raster - template raster with study extent and resolution
poly_path	Character string - file path to feature polygon layer
epsg	Numeric - ERSP code of coord ref system to be translated into WKT format

HMB3/nenswniche documentation built on Jan. 31, 2023, 11:46 p.m.