calculate_taxa_habitat_host_rasters: Intersect habitat suitability raster layers with other raster...

In HMB3/nenswniche: Rapidly estimate species ranges and intersect with other layers

Intersect habitat suitability raster layers with other raster layer (e.g. Fire).

Description

Takes a habitat suitability layer, and intersects it with a fire suitability layer.

Usage

calculate_taxa_habitat_host_rasters(
  taxa_list,
  targ_maxent_table,
  host_maxent_table,
  target_path,
  output_path,
  intersect_path,
  raster_pattern,
  fire_raster,
  cell_size,
  fire_thresh,
  write_rasters,
  poly_path,
  epsg
)

Arguments

taxa_list	Character string - The taxa to run maxent predictions for
targ_maxent_table	Data frame - A table of maxent results to be used for mapping
host_maxent_table	data frame - table of maxent results for host taxa
target_path	Character string - The file path containing the existing maxent models
intersect_path	Character string - The file path containing the intersecting rasters
raster_pattern	Character string - The pattern to look for of Invertebrate rasters
cell_size	Numeric - Cell size to resample output
write_rasters	Logical - Save rasters (T/F)?
poly_path	Character string - file path to feature polygon layer
epsg	Numeric - ERSP code of coord ref system to be translated into WKT format

HMB3/nenswniche documentation built on Jan. 31, 2023, 11:46 p.m.