API for HailinWei98/SCREEN
What the Package Does (One Line, Title Case)
| Global functions | |
|---|---|
| ATAC_Add_meta_data | Source code |
| ATAC_scQC | Source code |
| ATACciceroPlot | Source code |
| ATACumap | Source code |
| Add_meta_data | Man page Source code |
| CalculateGeneActivity | Source code |
| CalculatePerturbEnrichment | Source code |
| CustomTrack | Source code |
| DApeaks | Source code |
| DE_gene_plot | Man page Source code |
| EnhancerGeneExpression | Source code |
| GOenrichment | Source code |
| GetPromoter | Source code |
| IntegratedMixscape | Man page Source code |
| SCREEN | Man page Source code |
| ciceroPlot | Source code |
| config_generation | Source code |
| df_for_coords | Source code |
| enhancer | Source code |
| fragmentsSize | Source code |
| frame2indmatrix | Man page Source code |
| generate_plotting_subset | Source code |
| get_results | Source code |
| getsolvedmatrix | Man page Source code |
| getsolvedmatrix_with_permutation_cell_label | Man page Source code |
| heatmap | Source code |
| html_output | Source code |
| improved_scmageck_lr | Man page Source code |
| make_peak_track | Source code |
| normalize_scale | Man page Source code |
| plotBedpe | Source code |
| plotpair | Source code |
| scQC | Man page Source code |
| sgRNA_quality_plot | Man page Source code |
| sgRNAassign | Source code |
| single_gene_matrix_regression | Man page Source code |
| split_peak_names | Source code |
| umap | Source code |
| volcano | Source code |
