improved_scmageck_lr: function definitions ##### Improved scMAGeCK_LR, save and...

View source: R/improved_scmageck_lr.R

improved_scmageck_lrR Documentation

function definitions ##### Improved scMAGeCK_LR, save and return two data.frame: rownames indicates selected_gene while colnames indicates perturbations.

Description

function definitions ##### Improved scMAGeCK_LR, save and return two data.frame: rownames indicates selected_gene while colnames indicates perturbations.

Usage

improved_scmageck_lr(
  BARCODE,
  RDS,
  NEGCTRL,
  SELECT_GENE = NULL,
  LABEL = NULL,
  PERMUTATION = NULL,
  SAVEPATH = "./",
  LAMBDA = 0.01
)

HailinWei98/SCREEN documentation built on June 15, 2022, 12:21 a.m.