scQC: function definitions ##### Common single-cell quality...
In HailinWei98/SCREEN: What the Package Does (One Line, Title Case)
scQC R Documentation
function definitions ##### Common single-cell quality control.
This step will only save the VlnPlot before and after QC but not show.
Users can do this step by themselves using Seurat.
Description
function definitions ##### Common single-cell quality control.
This step will only save the VlnPlot before and after QC but not show.
Users can do this step by themselves using Seurat.
Usage
scQC(
mtx_dir,
prefix = "./",
label = "",
species = "Hs",
gene_frac = 0.01,
nFeature = c(200, 5000),
nCount = 1000,
mt = 10,
blank_NTC = FALSE
)
HailinWei98/SCREEN documentation built on June 15, 2022, 12:21 a.m.
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| scQC | R Documentation |
function definitions ##### Common single-cell quality control. This step will only save the VlnPlot before and after QC but not show. Users can do this step by themselves using Seurat.
Description
function definitions ##### Common single-cell quality control. This step will only save the VlnPlot before and after QC but not show. Users can do this step by themselves using Seurat.
Usage
scQC( mtx_dir, prefix = "./", label = "", species = "Hs", gene_frac = 0.01, nFeature = c(200, 5000), nCount = 1000, mt = 10, blank_NTC = FALSE )
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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