Description Usage Arguments Details Value Author(s) Examples
This function takes an character vector storing gene ids of interest and returns the biological sequence of the corresponding gene ids.
1 | geneSequence(genes, db)
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genes |
a character vector storing the gene id of a organisms of interest to be queried against the acnucdb database. |
db |
a character string specifying the database from which the sequence shall be retrieved. |
Sequence information is retrieved from the acnucdb database.
A list of sequences for each corresponding input gene stored as string.
Hajk-Georg Drost
1 2 3 4 5 6 7 8 9 | ## Not run:
# retrieve amino acid sequences from the 'swissprot' database
# for gene ids:"AT1G06090" = "Q9LND9" and "AT1G06100" = "Q9LND8"
seqs <- geneSequence(c("Q9LND9","Q9LND8"), db = "swissprot")
# choose different databases available
seqinr::choosebank()
## End(Not run)
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