Description Usage Arguments Value
Takes the output of subsetDimReduction
and finds
the stable low-dimension components across dimensionality reduced
subsets of the original data.
1 | estimateStability(dr, threshold, procrustes = FALSE, verbose = FALSE)
|
dr |
[list] either output of |
threshold |
[double] Threshold for stability between 0 and 1 or vector of thresholds between 0 and 1. |
procrustes |
[logical] indication whether a procrustes transformation to match the lower dimensional representations of common samples between subsets should be performed. |
verbose |
[logical] If set, progress messages are printed to standard out |
named list with [1] stability: list with one dataframe per threshold, where each dataframe contains the stability estimate of the low-dimensional components for that threshold value, [2] corr: data.frame with correlation of the low-dimensional components for all pairwise comparisons and components.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.