resultsComparison: Apply compareSetup and format results

In HannahVMeyer/DrStable: Estimating the stability of dimensionality reduction results

Description

Apply compareSetup and format results

Usage

resultsComparison(data_list, procrustes, verbose = FALSE)

Arguments

data_list	[list] output of subsetDimReduction. Each list entry is a matrix with row and column names; row.names are crucial to allow for the comparison of the lower dimensional embedding across common sample sets.
procrustes	[logical] indication whether a procrustes transformation to match the lower dimensional representations of common samples between subsets should be performed.
verbose	[logical] If set, progress messages are printed to standard out.

Value

named list with the size of the overlapping samples between samples sets (size), the reordered correlation coefficients (reorder), the maximum correlation (maxcor), the original column-wise correlation coefficients (componentxcomponent_r) and the reordered column-wise correlation coefficients (componentxcomponent_r_reordered)

HannahVMeyer/DrStable documentation built on Jan. 29, 2021, 11:42 a.m.