HelBor/wpm: Well Plate Maker

The Well-Plate Maker (WPM) is a shiny application deployed as an R package. Functions for a command-line/script use are also available. The WPM allows users to generate well plate maps to carry out their experiments while improving the handling of batch effects. In particular, it helps controlling the "plate effect" thanks to its ability to randomize samples over multiple well plates. The algorithm for placing the samples is inspired by the backtracking algorithm: the samples are placed at random while respecting specific spatial constraints.

Getting started

Package details

Bioconductor views BatchEffect ExperimentalDesign GUI MassSpectrometry Proteomics
URL https://github.com/HelBor/wpm https://bioconductor.org/packages/release/bioc/html/wpm.html
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
HelBor/wpm documentation built on June 15, 2021, 4:16 p.m.