Files in HelenaLC/muscat
Multi-sample multi-group scRNA-seq data analysis tools
.Rbuildignore
.github/workflows/check-bioc.yml
.gitignore
DESCRIPTION
NAMESPACE
NEWS
R/aggregateData.R
R/calcExprFreqs.R
R/data.R
R/mmDS.R
R/pbDS.R
R/pbFlatten.R
R/pbHeatmap.R
R/pbMDS.R
R/prepSCE.R
R/prepSim.R
R/resDS.R
R/simData.R
R/stagewiseDD.R
R/utils-mmDS.R
R/utils-pbDS.R
R/utils-simData.R
R/utils.R
R/validity-checks.R
README.md
data/example_sce.rda
inst/extdata/1a.png
inst/extdata/1b.png
inst/extdata/1d.png
inst/extdata/muscat.png
inst/extdata/refs.bib
man/aggregateData.Rd
man/calcExprFreqs.Rd
man/data.Rd
man/mmDS.Rd
man/pbDS.Rd
man/pbFlatten.Rd
man/pbHeatmap.Rd
man/pbMDS.Rd
man/prepSCE.Rd
man/prepSim.Rd
man/resDS.Rd
man/simData.Rd
man/stagewise_DS_DD.Rd
tests/testthat.R
tests/testthat/test-aggregateData.R
tests/testthat/test-calcExprFreqs.R
tests/testthat/test-mmDS.R
tests/testthat/test-pbDS.R
tests/testthat/test-pbHeatmap.R
tests/testthat/test-pbMDS.R
tests/testthat/test-prepSCE.R
tests/testthat/test-prepSim.R
tests/testthat/test-resDS.R
tests/testthat/test-simData.R
tests/testthat/test-utils.R
tests/testthat/test-validityChecks.R
tests/testthat/test_utils-simData.R
vignettes/analysis.Rmd
vignettes/detection.Rmd
vignettes/simulation.Rmd
