incl/hic_bin.R
In HenrikBengtsson/TopDomStudy: TopDom Study by Segal et al.
pathname <- system.file("compiledData", "human,HAP1,unique,chr=22.rds", package = "TopDomStudy")
reads <- read_rds(pathname)
print(reads)
binned <- hic_bin(reads, bin_size = 100000, intra_only = TRUE)
str(binned)
image(log2(binned[[1]]), axes = FALSE)
box()
HenrikBengtsson/TopDomStudy documentation built on May 14, 2021, 1:49 p.m.
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pathname <- system.file("compiledData", "human,HAP1,unique,chr=22.rds", package = "TopDomStudy")
reads <- read_rds(pathname)
print(reads)
binned <- hic_bin(reads, bin_size = 100000, intra_only = TRUE)
str(binned)
image(log2(binned[[1]]), axes = FALSE)
box()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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