parse_folders: Parses a directory structure

Description Usage Arguments Examples

Description

Parses a directory structure

Usage

1
parse_folders(path, patterns, mustWork = TRUE, ...)

Arguments

path

The path

patterns

A vector of regular expressions

mustWork

If TRUE, an error is thrown if path does not match patterns.

...

Not used

Examples

1
2
3
4
5
6
mdata <- parse_folders("annotationData/organisms/Homo_sapiens/Ensembl/79/",
           patterns=c("**", rootpath="annotationData(|,.*)",
                      "organisms", organism=".*", "**"))
str(mdata)

str(as.list(mdata))

HenrikBengtsson/pathinfo documentation built on May 7, 2019, 3:57 a.m.