makeBackground: Make a background list of genes (i.e., the statistical...
In HenryWotton/weighted_merge: Integrative Pathway Enrichment Analysis of Multivariate Omics Data
Description
Usage
Arguments
Value
Examples
Description
Returns A character vector of all genes in a GMT object.
Usage
1
Arguments
gmt
A GMT object.
Value
A character vector containing all genes in GMT.
Examples
1
2
3
fname_GMT <- system.file("extdata", "hsapiens_REAC_subset.gmt", package = "ActivePathways")
gmt <- read.GMT(fname_GMT)
makeBackground(gmt)[1:10]
HenryWotton/weighted_merge documentation built on Feb. 25, 2021, 10:29 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Examples
Description
Returns A character vector of all genes in a GMT object.
Usage
1 |
Arguments
gmt |
A GMT object. |
Value
A character vector containing all genes in GMT.
Examples
1 2 3 | fname_GMT <- system.file("extdata", "hsapiens_REAC_subset.gmt", package = "ActivePathways")
gmt <- read.GMT(fname_GMT)
makeBackground(gmt)[1:10]
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.