parameters: A list of parameters for simulation
In Hlch1992/Rprojects: Statistical modeling and inference of microbial interaction and stability for microbial dynamical systems
Description
Usage
Format
Examples
Description
This data is a list object which contains the baseline OTU table, sample data, time number and parameters beta matrix gamma matrix sigma and random effects. Details see reference.
Usage
1
data("parameters")
Format
A list with 8 objects as following.
baseFdataN2Ma numeric matrix containning baseline OTU table
conFdataN2La numeric matrix containning time-independent concomitant variables
timeNa numeric indicating total number of time points to simulate
interceptMa numeric vector indicating intercept of non-zero autoregressive model
betaMMa numeric matrix indicating the interaction matrix
gammaLMa numeric matrix indicating fixed effects for the zero state logit model
sigmaMa numeric vector indicating the measurement error standard deviation for the non-zero auto-regressive model
biN2Ma numeric vector indicating the random effects part of the non-zero auto-regressive model
Examples
1
Hlch1992/Rprojects documentation built on Feb. 10, 2020, 12:30 a.m.
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Description Usage Format Examples
Description
This data is a list object which contains the baseline OTU table, sample data, time number and parameters beta matrix gamma matrix sigma and random effects. Details see reference.
Usage
1 | data("parameters")
|
Format
A list with 8 objects as following.
baseFdataN2Ma numeric matrix containning baseline OTU table
conFdataN2La numeric matrix containning time-independent concomitant variables
timeNa numeric indicating total number of time points to simulate
interceptMa numeric vector indicating intercept of non-zero autoregressive model
betaMMa numeric matrix indicating the interaction matrix
gammaLMa numeric matrix indicating fixed effects for the zero state logit model
sigmaMa numeric vector indicating the measurement error standard deviation for the non-zero auto-regressive model
biN2Ma numeric vector indicating the random effects part of the non-zero auto-regressive model
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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