prs_plot: Creates evaluation plot for MSE, AUC or r squared

In Holdols/genstats: Analyse genetic data

Creates evaluation plot for MSE, AUC or r squared

Description

The function creates one plot for each fold in PRS. This plot will show the chosen method evaluated for each threshold. Lastly the function will plot the mean for each threshold. The function can be used to find which threshold of p-values best can describe the data.

Usage

prs_plot(PRS, data, method = "MSE")

Arguments

PRS	Output from PRS_cross.
data	List generated from gen_sim.
method	Indicates Which method each fold should be evaluated on.

Value

List containing two plots, one for each threshold and fold and one mean of all folds.

Holdols/genstats documentation built on June 10, 2022, 6:05 a.m.