vcfR2LDfiltered: vcfR2LDfiltered
In IDEELResearch/SeekDeepRANN: Basic Tool for Annotating the Output of SeekDeep for Exonic Regions
Description
Filtering an object of class vcfR for linkage disequilibrium via genetic autocorrelation.
Usage
1
2
vcfR2LDfiltered(vcffile = NULL, vcfR = NULL,
genautocorrresult = NULL, threshDist = 1000, biallelicsnps = TRUE)
Arguments
vcffile
A variant call file (vcf) path. This VCF will be converted to an object of class vcfR.
IDEELResearch/SeekDeepRANN documentation built on July 17, 2019, 3:21 p.m.
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Description
Filtering an object of class vcfR for linkage disequilibrium via genetic autocorrelation.
Usage
1 2 | vcfR2LDfiltered(vcffile = NULL, vcfR = NULL,
genautocorrresult = NULL, threshDist = 1000, biallelicsnps = TRUE)
|
Arguments
vcffile |
A variant call file (vcf) path. This VCF will be converted to an object of class |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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