read_ligands_PEAKS: read_ligands_PEAKS reads and combines PEAKS identifications...

Description Usage Arguments

Description

read_ligands_PEAKS reads and combines PEAKS identifications of PEAKS results folders.

Usage

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read_ligands_PEAKS(PEAKSresultsFolders, minReplicates = 1,
  ligands_min_length = 8, ligands_max_length = 14, uniprotDB = NULL,
  alleles.prediction = NULL)

Arguments

PEAKSresultsFolders

folders containing PEAKS results

minReplicates

minimum number of replicates (in different PEAKS results folders) desired for each identified peptide

ligands_min_length

minimum length of ligand sequences

ligands_max_length

maximum length of ligand sequences


IFIproteomics/E2Predictor documentation built on May 8, 2019, 10:54 a.m.