API for IMB-Computational-Genomics-Lab/scPred
scPred - Single cell prediction using singular value decomposition and machine learning classification
| Global functions | |
|---|---|
| .getFeatures | Source code |
| .intersectMat | Source code |
| .predictCellClass | Source code |
| .predictClass | Source code |
| .trainModel | Source code |
| crossTab | Man page |
| crossTab,scPred-method | Man page |
| eigenDecompose | Man page Source code |
| getAccuracy | Man page |
| getAccuracy,scPred-method | Man page |
| getFeatureSpace | Man page Source code |
| getLoadings | Man page |
| getLoadings,scPred-method | Man page |
| getPCA | Man page |
| getPCA,scPred-method | Man page |
| getPalette | Source code |
| getPredictions | Man page |
| getPredictions,scPred-method | Man page |
| getTrainPred | Man page Source code |
| getTrainResults | Man page |
| getTrainResults,scPred-method | Man page |
| metadata | Man page |
| metadata<- | Man page |
| plotEigen | Man page |
| plotEigen,scPred-method | Man page |
| plotExp | Man page |
| plotExp,scPred-method | Man page |
| plotLoadings | Man page |
| plotLoadings,scPred-method | Man page |
| plotPredProbs | Man page |
| plotPredProbs,scPred-method | Man page |
| plotTrainProbs | Man page Source code |
| processPreds | Man page Source code |
| projectNewData | Man page Source code |
| scPred | Man page |
| scPred-class | Man page |
| scPredSeurat | Source code |
| scPredict | Man page Source code |
| scaleDataSeurat | Source code |
| show,scPred-method | Man page |
| subsetMatrix | Source code |
| trainModel | Man page Source code |
