plotExp-scPred-method: Plot gene expression data

In IMB-Computational-Genomics-Lab/scPred: scPred - Single cell prediction using singular value decomposition and machine learning classification

Description

Plots a PCA and projection with the gene expression values for a given gene

Usage

## S4 method for signature 'scPred'
plotExp(object, gene, pc = c(1, 2), low = "gray",
  high = "red")

Arguments

object	scPred object
gene	Gene id. Must match one of the row names in the gene expression matrix used as input
pc	Vector of length 2 with the two dimensions to be plotted
low	Color for low gene expression
high	Color for high gene expression

IMB-Computational-Genomics-Lab/scPred documentation built on Jan. 11, 2020, 7:37 a.m.