make.volcano.plot: Make an enhanced volcano plot

In ImmuneDynamics/Spectre: High-dimensional cytometry and imaging analysis.

Make an enhanced volcano plot

Description

Make an enhanced volcano plot

Usage

make.volcano.plot(
  dat.p,
  dat.fc,
  vars,
  title,
  subtitle = NULL,
  xlim = c(-6, 8),
  ylim = c(0, 4),
  path = getwd(),
  width = 7,
  height = 8,
  pCutoff = 0.05,
  FCcutoff = 0.26,
  hline = c(0.01, 0.05),
  hlineCol = c("grey75", "grey25"),
  pointSize = 3,
  labSize = 3,
  col = c("black", "black", "blue", "red3"),
  colAlpha = 1,
  ...
)

ImmuneDynamics/Spectre documentation built on Nov. 12, 2023, 8:12 a.m.