package.check: package.check - a function to check the installation of all...
In ImmuneDynamics/Spectre: High-dimensional cytometry and imaging analysis

package.check

R Documentation

package.check - a function to check the installation of all required packages.

Description

This function allows you to check to see if all the common use packages dependencies for Spectre are installed. See https://sydneycytometry.org.au/spectre for usage instructions and vignettes.

Usage

package.check(type = "general")

Arguments

type

DEFAULT = "general". If "general", then checks for the packages required for general Spectre usage. If "spatial", then checks for additional packages required for spatial analysis. If "ML", then checks for additional packages required for machine-learing functionality.

Value

returns an error message if one of the common use packages are not installed. Proceeds in order of package importance, and only the first error message encountered will be returned.