read.spatial.files: Read TIFF files into R and and create spatial data object
In ImmuneDynamics/Spectre: High-dimensional cytometry and imaging analysis.
View source: R/read.spatial.files.R
read.spatial.files R Documentation
Read TIFF files into R and and create spatial data object
Description
Read TIFF files into R and and create spatial data object
Usage
read.spatial.files()
Arguments
dir
Directory location of where the ROI files are located
correct.extent
Correct extent so that the minimum is 0,0. Default TRUE
flip.y
Flip the data arrangement for the y-axis. Default TRUE
value.modifier
Data modifier based on image processing. Default 65535
lois
Default = NULL. You can provide a list of only some of the ROI folders to read in.
Value
Returns a list of spatial data objects.
ImmuneDynamics/Spectre documentation built on Nov. 12, 2023, 8:12 a.m.
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View source: R/read.spatial.files.R
| read.spatial.files | R Documentation |
Read TIFF files into R and and create spatial data object
Description
Read TIFF files into R and and create spatial data object
Usage
read.spatial.files()
Arguments
dir |
Directory location of where the ROI files are located |
correct.extent |
Correct extent so that the minimum is 0,0. Default TRUE |
flip.y |
Flip the data arrangement for the y-axis. Default TRUE |
value.modifier |
Data modifier based on image processing. Default 65535 |
lois |
Default = NULL. You can provide a list of only some of the ROI folders to read in. |
Value
Returns a list of spatial data objects.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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