taxon_index_to_taxon_table | R Documentation |
Taxon data is stored as a set of taxa with taxon ids and parent taxon
ids. For any given dataset, the metadata includes an index containing
this information for all taxa used in data worksheets and all parent
taxa required. This internal function takes the taxon index metadata
and builds a table including the taxonomic hierarchy for each worksheet
taxon. It is used by get_taxa
and
get_taxon_coverage
.
taxon_index_to_taxon_table(taxon_index)
taxon_index |
A taxon index list from the dataset metadata, |
Note that this function does not discriminate between NCBI and GBIF taxon indices: they are both mapped onto the same table structure. Public calling functions should handle any merging and tidying required for a neat public API.
A data frame adding higher taxon level information for each taxon
get_taxa
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