Files in ImperialCollegeLondon/safe_data
R interface to data from the SAFE Project

.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/index.R R/load_safe.R R/locations.R R/metadata.R R/safedata.R R/search_safe.R R/taxa.R R/zzz.R README.md
_pkgdown.yml
docs/LICENSE-text.html
docs/articles/index.html
docs/articles/overview.html
docs/articles/using_safe_data.html
docs/articles/using_safe_data_files/figure-html/unnamed-chunk-21-1.png
docs/articles/using_safe_data_files/figure-html/unnamed-chunk-23-1.png
docs/articles/using_safe_data_files/figure-html/unnamed-chunk-24-1.png
docs/authors.html
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/addData.html
docs/reference/addLocations.html
docs/reference/addTaxa.html
docs/reference/addTaxonHeirarchies.html
docs/reference/add_locations.html
docs/reference/add_taxa.html
docs/reference/apiSearch.html
docs/reference/buildFilePathFromVersions.html
docs/reference/buildVersionsDataframe.html
docs/reference/build_taxonomy.html
docs/reference/cache_index.html
docs/reference/checkApiCall.html
docs/reference/checkRecordDownloaded.html
docs/reference/concept_summary.html
docs/reference/createSafe.html
docs/reference/data_worksheet_summary.html
docs/reference/dot-onLoad.html
docs/reference/downloadSAFE.html
docs/reference/download_gazetteer.html
docs/reference/download_index.html
docs/reference/download_location_aliases.html
docs/reference/download_safe_files.html
docs/reference/extract_record_id.html
docs/reference/fetch_record_metadata.html
docs/reference/getDataClass.html
docs/reference/getNameBackbone.html
docs/reference/getRecordIdFromDoi.html
docs/reference/getSAFE.html
docs/reference/getSafeDataClassType.html
docs/reference/getTaxonWrapper.html
docs/reference/get_data_dir.html
docs/reference/get_index.html
docs/reference/get_local_index.html
docs/reference/get_locations.html
docs/reference/get_phylogeny-1.png
docs/reference/get_phylogeny.html
docs/reference/get_record_metadata.html
docs/reference/get_remote_index.html
docs/reference/get_taxa.html
docs/reference/get_taxonomy.html
docs/reference/importSAFE.html
docs/reference/index.html
docs/reference/isCategorical.html
docs/reference/isSAFE.html
docs/reference/isSafeRecord.html
docs/reference/isSafeTypeCategorical.html
docs/reference/load_gazetteer.html
docs/reference/load_index.html
docs/reference/load_location_aliases.html
docs/reference/load_record_metadata.html
docs/reference/load_safe_data.html
docs/reference/load_safe_worksheet.html
docs/reference/nameBackboneToDf.html
docs/reference/nullToNA.html
docs/reference/print.safe_record_set.html
docs/reference/print.safedata.html
docs/reference/printSummary.html
docs/reference/printVersions.html
docs/reference/processData.html
docs/reference/processLocations.html
docs/reference/processSAFE.html
docs/reference/processSafeSummary.html
docs/reference/processSummary.html
docs/reference/processTaxa.html
docs/reference/readTransposedXlsx.html
docs/reference/record_summary.html
docs/reference/retrieve_index.html
docs/reference/safe_api_search.html
docs/reference/safedata.env.html
docs/reference/safedata.html
docs/reference/searchAuthor.html
docs/reference/searchDates.html
docs/reference/searchFields.html
docs/reference/searchSpatial.html
docs/reference/searchTaxa.html
docs/reference/searchText.html
docs/reference/search_safe.html
docs/reference/setSafeDir.html
docs/reference/set_index_availability.html
docs/reference/set_safe_dir.html
docs/reference/show_concepts.html
docs/reference/show_record.html
docs/reference/show_worksheet.html
docs/reference/simpleCap.html
docs/reference/str.safedata.html
docs/reference/updateIndex.html
docs/reference/updateVersionCache.html
docs/reference/update_safe_data_index.html
docs/reference/validate_record_ids.html
docs/reference/verbose_message.html
docs/reference/zenodoRecordApiLookup.html
docs/reference/zenodoVersionsApiLookup.html
inst/example_data_dir/1400561/1400562/1400562.json
inst/example_data_dir/1400561/1400562/Psomas_Ant_Pselaphine_SAFE_dataset.xlsx
inst/example_data_dir/gazetteer.geojson
inst/example_data_dir/index.json
inst/example_data_dir/location_aliases.csv
man/add_locations.Rd man/add_taxa.Rd man/download_gazetteer.Rd man/download_index.Rd man/download_location_aliases.Rd man/download_safe_files.Rd man/fetch_record_metadata.Rd man/get_data_dir.Rd man/get_locations.Rd man/get_phylogeny.Rd man/get_taxa.Rd man/load_gazetteer.Rd man/load_index.Rd man/load_location_aliases.Rd man/load_safe_data.Rd man/load_safe_worksheet.Rd man/safe_api_search.Rd man/safedata.Rd man/safedata.env.Rd man/search_safe.Rd man/set_safe_dir.Rd man/show_concepts.Rd man/validate_record_ids.Rd man/verbose_message.Rd
safe_data.Rproj
vignettes/overview.Rmd vignettes/using_safe_data.Rmd
ImperialCollegeLondon/safe_data documentation built on Oct. 8, 2019, 4:27 p.m.