search_in_arenaidb: Retriving the informations about the aliases and the...
In InfOmics/LErNet: LErNet: characterization of lncRNAs via context-aware network expansion and enrichment analysis

Retriving the informations about the aliases and the interactions of lncrna filtering by genes and proteins

search_in_arenaidb(
  lncrna_ensembl_ids,
  pcgene_ensembl_ids = NULL,
  protein_ensembl_ids = NULL,
  protein_symbols = NULL
)

`lncrna_ensembl_ids`	a list of lncrnas in ensembl id format
`pcgene_ensembl_ids`	a list of protein coding genes in ensembl id format
`protein_ensembl_ids`	a list of protein in ensembl id format
`protein_symbols`	a list of protein in symbol id format

return_value a list of three data.frame: alias_mapping, gene_icontext and protein_icontext

InfOmics/LErNet documentation built on April 10, 2021, 4:49 p.m.

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