DrugSyn-class: DrugSyn class

Description Usage Arguments Methods (by generic) Slots Examples

Description

S4 class to store drug combination data

Usage

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## S4 method for signature 'DrugSyn'
doses(object)

## S4 replacement method for signature 'DrugSyn,list'
doses(object) <- value

## S4 method for signature 'DrugSyn'
expData(object)

## S4 replacement method for signature 'DrugSyn,data.frame'
expData(object) <- value

## S4 method for signature 'DrugSyn'
respInd(object)

## S4 replacement method for signature 'DrugSyn,list'
respInd(object) <- value

## S4 method for signature 'DrugSyn'
drugNames(object)

## S4 replacement method for signature 'DrugSyn,vector'
drugNames(object) <- value

## S4 method for signature 'DrugSyn'
content(object)

## S4 replacement method for signature 'DrugSyn,character'
content(object) <- value

## S4 method for signature 'DrugSyn'
plot(x, type = c("heatmap", "parallel", "ind", "surface"),
  ...)

Arguments

object

a DrugSyn

value

replacement value

x

DrugSyn object

type

type of plot

...

arguments given to plots functions

Methods (by generic)

Slots

data

data.frame

doses

list

respInd

list

drugNames

vector

dataMean

data.frame

content

character

typeHill

numeric

range

character

Examples

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data(exDrugSyn)
## heatmap
plot(exDrugSyn)
## surface
plot(exDrugSyn, type = "surface")
## parallel plot
plot(exDrugSyn, type = "parallel", ref = "drugA")
## individual response
plot(exDrugSyn, type = "ind", drug = "drugB")

InstitutCurie/synerdrug documentation built on Sept. 19, 2017, 8:42 a.m.