FilterCellBySumCut: Title Quality Control on cells by summary matrix

In Irenexzwen/SingleCellAnalysisFunc:

Description

Title Quality Control on cells by summary matrix

Usage

FilterCellBySumCut(summary_, uniqmp = u, prgene = p, mt = m,
  ercc = e, rRNA = r)

Arguments

summary_	Str, path to summary file (with header and rownames)
uniqmp	list of length two. u[1] is the lower bound, and u[2] is the upper bound.
prgene	list of length two.
mt	list of length two.
ercc	list of length two.
rRNA	list of length two.

Value

list, list of filtered cell names.

Examples

filtered_cells <- FilterCellBySumCut(sum,uniqmp=c(60,100),prgene=c(4000,12000),mt=c(0,10),ercc=c(0,15,rRNA=c(0,20)))

Irenexzwen/SingleCellAnalysisFunc documentation built on Nov. 11, 2020, 10:17 a.m.