HoneyBADGER_setGexpDev: Set needed absolute gene expression deviance to be able to...

In JEFworks/HoneyBADGER: HMM-integrated Bayesian approach for detecting CNV and LOH events using single-cell RNA-seq data

Description

Set needed absolute gene expression deviance to be able to distinguish neutral from amplified or deletion regions

Arguments

alpha	Alpha level (default: 0.05)
n	Number of repeats for estimating parameter (default: 100)
seed	Random seed
plot	Plotting
verbose	Verbosity

JEFworks/HoneyBADGER documentation built on July 24, 2021, 3:01 p.m.