clean_ensgene: Clean Ensembl reference gene list
In JH-Zhou/HandyCNV: HandyCNV: An R package for Standardized Summary, Annotation, Comparison, and Visualization of CNV, CNVR and ROH
Description
Usage
Arguments
Value
Description
Main works are add column names for the table, add gene names to new table, replace missing gene names
with Ensembl ID then remove duplicated gene, then return the clean formatted gene list.
Usage
1
clean_ensgene(refgene, ens_id)
Arguments
refgene
ensembl reference gene download from UCSC website
ens_id
ensembl id download from UCSC website
Value
formatted gene list.
JH-Zhou/HandyCNV documentation built on Dec. 18, 2021, 12:25 a.m.
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Description Usage Arguments Value
Description
Main works are add column names for the table, add gene names to new table, replace missing gene names with Ensembl ID then remove duplicated gene, then return the clean formatted gene list.
Usage
1 | clean_ensgene(refgene, ens_id)
|
Arguments
refgene |
ensembl reference gene download from UCSC website |
ens_id |
ensembl id download from UCSC website |
Value
formatted gene list.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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